Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03534 ATGGAGATCTTCTCCTTCCTCTTCCTTTCCCTTCTCTTCCCTCTCTGTCTCTACTTCGCTAGAGAAAAGTCCCGCGAAACCAACAAAGGCTTCAGAGTCTACCCTTTCATCAGAACCTTACCGGAATTCCTTAAAAACCGCCACCGGTTCCTCGACTGGACCACCCAAGTACTCCGCGAATGCCCAAACAACACCGCCGTCTTCGCCCATTTCTATAAAACCCACTCCGTTCTAACCGCCAACCCCGCCAACGTGGAACACATGCTAAAAACCCAATTCCAAAACTACCCAAAGGGCGAACGTTTCATCCACCTCCTCCAAGACTTCCTGGGCCACGGAATCTTCAACTCAGATAGCGAACTCTGGAAGGTGCAGCGGAAAGTCGCCAGCTATGAGTTCAGCACCAAATCACTCCATAACTTCATCGTCAACACCGTCACCGAGGAACTTCAAAACAGACTTCTTCCAATTCTCTCCAAATCCTCACAGACAAACAGGGTCCTCAATTTGCAGGACCTCCTCGAGCGCTTCGCCTTCGACAACGTCTGCAAGCTAGCCTTCAATGTCGACCCCGCCTGTCTCGGTGGCGACGGCGCTTCCGGCGCCGAGTTCATGCGCGCTTTCGAGGACGCCGCCGAGCTGAGTTCACAGAGGTTCATGTGCGTGACACCGTTTATTTGGAAACTAAAGAAACTGTTCAACGTTGGATCAGAAGGAAGGCTCAGAGAATCAATCATCTCCGTCCACGAGTTCGCTGACTCCATCATACGGTCCACATTGGAAGCCAAGGAGCCCACCGGCGACGGCGAAGATTTACTTTCGAGGTTCATCAAAGCAGAGGAGAGCTCCCCAGAGTTTCTCCGCGACGTTGTGATAAGTTTCATTCTCGCCGGACGTGACACGACGTCGTCCGCGCTCACCTGGTTCTTCTGGATTCTCTCTTCCAGACCTCACGTGCGGAGAAAAATTCGCGATGAAATCGCAAGGGTTCGGTCGGGCACCCGCGGCGTTGGCGTGTTCAGTTACGATGAGCTGAGGGAGATGCAGTACTTACACGCGGCAATTTCGGAGACAATGAGGTTGTATCCGCCCGTGCCGATTGACTCGAAGGAGTGTCTGAACGGCGACGTTTTGCCTGATGGAACGAAGATTGGGAAGGGATGGTTCGTAACGTACCACGCGTACGCAATGGGGAGGATGGAGAGCGTGTGGGGAAAAGACTGCACGGAATTTAATCCCGAAAGGTGGTTGGAGAATGGCGCCTTCCGACCGGAGAGTCCGTTTCGTTTTCCGGTATTTCACGCAGGTCCCCGGACGTGTCTTGGCAAAGAAATGGCTTATATTCAGATGAAGTCGATCGCAGCTTCCGTGATGGAGAGGTTTGAGATTGAGGCACTTAATAACGACACGTGTGCAGAACCTGTGTTGTCTTTGACCCTCAGGATGAAGGGAGGGTTGCCAGTGAGGGTAAGAGCAAGGGATGGCTTCTAA 1491 0.5272 MEIFSFLFLSLLFPLCLYFAREKSRETNKGFRVYPFIRTLPEFLKNRHRFLDWTTQVLRECPNNTAVFAHFYKTHSVLTANPANVEHMLKTQFQNYPKGERFIHLLQDFLGHGIFNSDSELWKVQRKVASYEFSTKSLHNFIVNTVTEELQNRLLPILSKSSQTNRVLNLQDLLERFAFDNVCKLAFNVDPACLGGDGASGAEFMRAFEDAAELSSQRFMCVTPFIWKLKKLFNVGSEGRLRESIISVHEFADSIIRSTLEAKEPTGDGEDLLSRFIKAEESSPEFLRDVVISFILAGRDTTSSALTWFFWILSSRPHVRRKIRDEIARVRSGTRGVGVFSYDELREMQYLHAAISETMRLYPPVPIDSKECLNGDVLPDGTKIGKGWFVTYHAYAMGRMESVWGKDCTEFNPERWLENGAFRPESPFRFPVFHAGPRTCLGKEMAYIQMKSIAASVMERFEIEALNNDTCAEPVLSLTLRMKGGLPVRVRARDGF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03534 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Spst1g03534 496 SUPERFAMILY Cytochrome P450 30 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03534 496 Gene3D Cytochrome P450 18 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03534 496 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03534 496 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03534 496 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03534 496 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03534 496 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03534 496 FunFam Cytochrome P450 21 496 - -
Spst1g03534 496 CDD CYP86A 77 486 - -
Spst1g03534 496 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03534 496 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03534 496 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03534 496 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03534 496 PANTHER CYTOCHROME P450 20 488 - -
Spst1g03534 496 Pfam Cytochrome P450 69 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03534 Spst-Chr1 44500546 44502036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03534 23 493 Cytochrome P450 AT3G56630 58.824 0.0 597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03534 1 44500546 44502036 Spst1g03534 1 44500546 44502036 ECH
Spst3g00759 3 11135279 11135671 Spst1g03534 1 44500546 44502036 ECH