Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02275 ATGGTGGCTGTGGTTTCCCAAGAAAATGTTGTGGCATTGGTTTCTCGTACCGGTAGGGAGTTGCAACGTTATAGAAAAGGTCGTCGTCAAGTTGTGGGATGCATACCATACAGATTTAAGAATGAGCAGAAAACTTCGATGGACGTTTCTGATGAATTGGAAGTTCTGGTTATCAGTTCTCAGAAAGGAAAAGGGATGCTATTCCCAAAGGGAGGCTGGGAATTAGACGAATCGAAAAAGGAAGCAGCTTTGAGAGAAACTATAGAGGAAGCTGGGGTGAGAGGCATTGTTGGGGGTAAATTGGGTAAATGGAGTTTCAAGAGTAAGACTCACAACACTTTCTACGAAGGCTACATGTTCCCTTTACTTGTTCAAGAGCAATTGGAGTTTTGGCCTGAGCAAAACGTTCGTAAACGAATATGGATGAGCGTCACTGAAGCAAGGGATGTTTGTCAACACTGGTGGATGAAGGAAGCTCTAGACAGACTAGTAAACCGTCTAGCGGGTCAAAAAGTTGGTCGTGATAATAAGCAAGTTCTTGGTTCTATAAACTGCTCGAGAGATGCCAAATCTGACTTGTAA 582 0.433 MVAVVSQENVVALVSRTGRELQRYRKGRRQVVGCIPYRFKNEQKTSMDVSDELEVLVISSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGIVGGKLGKWSFKSKTHNTFYEGYMFPLLVQEQLEFWPEQNVRKRIWMSVTEARDVCQHWWMKEALDRLVNRLAGQKVGRDNKQVLGSINCSRDAKSDL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02275 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 166 - -
Spst1g02275 193 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Spst1g02275 193 SUPERFAMILY Nudix 23 167 IPR015797 -
Spst1g02275 193 FunFam Nudix hydrolase 17, mitochondrial 14 166 - -
Spst1g02275 193 CDD Nudix_Hydrolase_9 30 157 IPR047198 GO:0016462
Spst1g02275 193 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Spst1g02275 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 14 168 - -
Spst1g02275 193 Pfam NUDIX domain 50 161 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02275 Spst-Chr1 31487034 31488341 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02275 1 31487034 31488341 Spst1g02275 1 31487034 31488341 ECH
Spst8g00328 8 2960418 2961504 Spst1g02275 1 31487034 31488341 PCT