Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02274 ATGGCGAAAACAAAACAAACCCTAACCCTTTTGTTAATCTCGTCATCTTTCGCCACCTTCTTCGTTCTCTCTCTCTCCTCCGCCGCGGACTTCTTCCTCTACGGTGGGTGCACGCAGCAACGGTACGCCTCCAACTCGCCCTACGAGTCAAACCTCAATTCGCTCCTCACCTCGCTGGTCAACTCGGCCACGTACTCCTCCTACAGCAACCTCACCGTGGTGGGGTCCAGCCGGAGCGACATTGTTTACGGACTCTACCAGTGCCGCGGCGACCTCGCCATGCCGGACTGCGCCGCATGCGTTGCGCGTGCGGTCTCTCGCGCCGGCCAGCTCTGCCCGGGGGCGTGCGGCGGCGCGGTGCAGCTCGACGGGTGTTTCGTGAAGTACGACAACGCCACGTTCCTGGGCGTGGAGGACAAGACGGTGGTGTTGAAGAGGTGTGGGCCCTCCCTGGGGTTCGGGTCGGGCGCGGTGAGCGAGAGAGATGCGGTATTGGGTGGGTTGCTGGGTTCGGGAGGGTTTTTTCGGGTTGGGGGGTCGGGTGAGGTGAAGGGCGTGGCGCAGTGTTGTGGGGATTTGAGCTTTTCTGAGTGTCAGGATTGTGTGGGGGATGCAATCCGACGGCTGAGGAGTGAGTGTGCTGGTGCGGACTATGGGGATGTGTTCTTGGGGAAGTGTTACGCCAGGTTCTCCACTAATGGGGCTCATGCTTACAACAGCAAGGCCCATGCAGGAAAATCGGGGAACGAAGGTGAAAAGACATTCGCAATAATTGTTGGATTATTAGCAGGAGTTGCTGTACTCATTATTTTCCTTGCTTTCTTGAGAAGGCTTTGTGAGGGACACGGTAAATAA 855 0.5778 MAKTKQTLTLLLISSSFATFFVLSLSSAADFFLYGGCTQQRYASNSPYESNLNSLLTSLVNSATYSSYSNLTVVGSSRSDIVYGLYQCRGDLAMPDCAACVARAVSRAGQLCPGACGGAVQLDGCFVKYDNATFLGVEDKTVVLKRCGPSLGFGSGAVSERDAVLGGLLGSGGFFRVGGSGEVKGVAQCCGDLSFSECQDCVGDAIRRLRSECAGADYGDVFLGKCYARFSTNGAHAYNSKAHAGKSGNEGEKTFAIIVGLLAGVAVLIIFLAFLRRLCEGHGK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02274 284 FunFam cysteine-rich repeat secretory protein 3 29 134 - -
Spst1g02274 284 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 279 - -
Spst1g02274 284 Pfam Salt stress response/antifungal 178 232 IPR002902 -
Spst1g02274 284 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Spst1g02274 284 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Spst1g02274 284 ProSiteProfiles Gnk2-homologous domain profile. 135 235 IPR002902 -
Spst1g02274 284 Gene3D - 163 234 IPR038408 -
Spst1g02274 284 Gene3D - 29 134 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02274 Spst-Chr1 31479232 31480403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02274 11 231 Pollen Coat Proteome AT4G20670 27.083 1.17e-17 79.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02274 1 31479232 31480403 Spst1g02274 1 31479232 31480403 ECH
Spst8g00327 8 2950003 2951581 Spst1g02274 1 31479232 31480403 PCT