Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01894 ATGGGTTCATTCCAGACACCAATTGGAATGAGAAGTTCCACATTGCTAGAGACTTCATGTGGGTTCCTGTTACAGGAACTGCAGATTATATGGGATGAAGTTGGAGAAGACAAATTCGAAAGGGAGAAGGTTCTACTAGATTTGGAGCAAGAGTGCCTTGAGGTTTACAGAAGAAAAGTTGACAGAGCAAATATATCTAGAGCTCGTCTGCATCAGGAATTGGCCGAGGCTGAGGCTGAATTTACTCACCTTCTTTTGTCCCTCGGTGAACGATCTCTACCTGGACGGCCGGAGAAAAGGGCAGGTTCACTAAAAGAGCAGCTAGATTCAATCACCCCAGCACTCCAGGAAATGCGTTTGAGGAAAGAAGAGAGGTTAAACCAATTCCGAGCTGTGCAAGGTCAAATTCAAAAAATTTCTGCCGAAATTGCAGGCAACTCAGAAAATGAACCTTCATCCATTATTGTAAACGAGAATGATCTTTCACTAAAAAGACTTGAGGAGTATCAGAATGAGTTGAAAAGACTTTACAATGAGAAGAATGAAAGACTTCAGCACGTGGAGAAATACATTGACATGATACACAGCTTGTCCACGATCTTGGGAAAGGATTCTTCAGCAATCATCATGGAAGTTCATGCAAGTTTAAATGACTTGTGTGGAATAACAAAAAATATAGGTGACACTATCTTAGATAAACTCAACATCACGGTGGAGTCCCTTTTTGAAGAAAAGCAAAATCGGCTGGACAAGCTTCACCATTTAGGCAAAGCACTGTCAAATATATGGAATCTTATGGACACACCATACAATGAGCGACACTCATTTTCTCACGTAATCAATTTGTTGTCACTCTCGTCAGCAGAAGTAACAGATCCGGGAAGTCTTACTCTAGAAATAGTCCAGCAGACTGAAGCTGAAGTAAAGAGACTGGATCAACTAAAAGCAAGCAAGATGAAGGAGCTATTCCAGAAGAAACAGGAGGAACTAGAGTTGATATGCAAGAAATCACATGTGGAGATTCCTTCAAGGGAAGAGATGAACAATATAATTAACCTCATAAACTCAGGGGAGATTGATCATTCGGATCTCCTCTTGAGCATGGATGAACAGATATCAAGAGCAAAAGAAGAGGCTTCAAGCAGGAAGGCTATCATGGAGAAAGTGGAGAAGTGGATGTTAGCACGTGATGAGGAGCGCTGGCTAGAAGAATATAGCAGGGATGAGAATCGATACTCTGTCAGTAGAGGAGCTCACAAAAACTTGAGACGTGCTGAACGAGCCCGTATAATGGTCAGCAGAATGCCAGCTTTGGTTGATTTGCTAATAAAAATGACTAGAAGTTGGGAAGAAGAAAGAAATAAAGTTTTCTTGTATGATCAGGTACCTCTGATGGCCATATTGGAAGAATATAACATACTAAGACGAGAAAAAGAGGAGGATATGAAAAGACAGCAGCCTTGGGAAAAAAAGAGAATTCAAAGTCAAGTAGTTGAGCGAGACAGTACTCATACGTCAAGACCCAGCACCAGCAGTAGGCGTCTTCCAAGTAGAAGCATGAATGGAGCTCTGGACAGTTCTGTGGTCATGAACAGAAGGCTTTCTATGGGAATCCAACAGCTGGGATCCAACAGCATCAATTCAGGGAATCAAGGCAAGTCCTTCATTAAGGATGGAAGAAATGCCCTCAGGAAAAAGATTTTTGGCGACCCTGCTTTCATCTCTCATATGAGAGATGACGCATCTTCTGCGGTGTCAACACATTTTATACCATTTTCCCCTTAA 1785 0.4185 MGSFQTPIGMRSSTLLETSCGFLLQELQIIWDEVGEDKFEREKVLLDLEQECLEVYRRKVDRANISRARLHQELAEAEAEFTHLLLSLGERSLPGRPEKRAGSLKEQLDSITPALQEMRLRKEERLNQFRAVQGQIQKISAEIAGNSENEPSSIIVNENDLSLKRLEEYQNELKRLYNEKNERLQHVEKYIDMIHSLSTILGKDSSAIIMEVHASLNDLCGITKNIGDTILDKLNITVESLFEEKQNRLDKLHHLGKALSNIWNLMDTPYNERHSFSHVINLLSLSSAEVTDPGSLTLEIVQQTEAEVKRLDQLKASKMKELFQKKQEELELICKKSHVEIPSREEMNNIINLINSGEIDHSDLLLSMDEQISRAKEEASSRKAIMEKVEKWMLARDEERWLEEYSRDENRYSVSRGAHKNLRRAERARIMVSRMPALVDLLIKMTRSWEEERNKVFLYDQVPLMAILEEYNILRREKEEDMKRQQPWEKKRIQSQVVERDSTHTSRPSTSSRRLPSRSMNGALDSSVVMNRRLSMGIQQLGSNSINSGNQGKSFIKDGRNALRKKIFGDPAFISHMRDDASSAVSTHFIPFSP 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01894 594 Coils Coil 159 186 - -
Spst1g01894 594 MobiDBLite consensus disorder prediction 499 522 - -
Spst1g01894 594 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 16 550 IPR007145 GO:0000226|GO:0008017
Spst1g01894 594 MobiDBLite consensus disorder prediction 480 522 - -
Spst1g01894 594 Coils Coil 53 80 - -
Spst1g01894 594 Coils Coil 301 321 - -
Spst1g01894 594 Gene3D - 372 506 - -
Spst1g01894 594 MobiDBLite consensus disorder prediction 480 498 - -
Spst1g01894 594 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01894 Spst-Chr1 27118084 27122041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01894 12 555 EF-hand Containing Proteins AT5G62250 36.823 2.20e-93 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01894 1 27118084 27122041 Spst1g01894 1 27118084 27122041 ECH