Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00655 ATGACAAAAGAATTCAGCGAGAAAACCGAGGTGAGTGTAGGGTTGGAAGCCCTGTGGCAAGCCATGTCAAAGGATCTGGGAGTCACAGTTGCAAAGGTTATACCAAACATTGTGAAAGATGTGAAATTGGTGGAAGGTGATGGAGGGGTAGGCACAATCTTTCTCTTCACTTTTTTCTCTGGTGTGACTCCAGTGAGTTACCAGAAGGAGAAGATCACAGAGCTTGATGAGATTTCTCACGAAATTGGGTTGCAAGTGGTTGAAGGAGGGTATCTGGAGCAAGGTTTCTCATACTACAAGACAACTTTTCAACTATCTGCAACTGGAGAGGATAAGACTTTGGTCAACGTGAAGATTTTTTTCAACCATGAGTCGGAGACTGAAGAAAATGCTCAACCAGTGAAGACAGCAGAGTCTGCTTTACACTTTCTGCGATGCCTGGAAACATATCTGTTGAATGAGGATTGA 468 0.4359 MTKEFSEKTEVSVGLEALWQAMSKDLGVTVAKVIPNIVKDVKLVEGDGGVGTIFLFTFFSGVTPVSYQKEKITELDEISHEIGLQVVEGGYLEQGFSYYKTTFQLSATGEDKTLVNVKIFFNHESETEENAQPVKTAESALHFLRCLETYLLNED 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00655 155 Gene3D - 1 154 IPR023393 -
Spst11g00655 155 CDD Bet_v1-like 3 151 - -
Spst11g00655 155 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Spst11g00655 155 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Spst11g00655 155 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Spst11g00655 155 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Spst11g00655 155 PRINTS Major pollen allergen Bet V1 signature 25 35 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Spst11g00655 155 Pfam Pathogenesis-related protein Bet v 1 family 4 154 IPR000916 GO:0006952
Spst11g00655 155 PANTHER - 5 154 - -
Spst11g00655 155 FunFam Major pollen allergen Bet v 1-A 1 155 - -
Spst11g00655 155 SUPERFAMILY Bet v1-like 4 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00655 Spst-Chr11 28748828 28749388 Proximal