Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00552 ATGCCTTCTTCCCCAAAGTCCTACGCCCTCCCCTACGTGCGCTACCAATCGCCCTTTGCCACGCGCAGATCCACCGCCTTCCTCCTCGGCCTCTCCGCCCTCCTCCTCCTCCTCTTCTTCTTCGCCATCTCTTCCTTCCTCGCCCAGATTCGTAACAACCGCTGCGTCAACGCGCACCCTCGATCGGTGCGCGTCGTCTGGGAACACGCCGGCAACCCCAACACAGCTGTTGGTGTCGGTGATGCAGAGAGGCATAAGGTTATGGGGTTTGTGGGCATTCAAACGGGGTTTGGATCCGGTGGGAGGAGAGAGGCGTTGAGAAAGACGTGGTTTCCCTCTGATCGCCAAGGCCTTCATCGCTTGGAAGAAGCCACTGGGTTGGCTTTTAGGTTTATCATTGGTAGAACAAGTGACAGAGCAAAGATGTCTGCACTTCAGAAGGAAGTAGCAGAATATGATGATTTCATTTTGTTGGATATCCAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTAGCTTTCTTCAAAGCTGCTTATGCTTTTTTTGATGCTGAATTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTATCATTACTACTGGCCAAAGAGCGATCTCATCCTCAGACATACATAGGATGCATGAAAAAAGGACCTGTTTTCACTGATCCAAAACTCAAATGGTATGAGCCATTGTCAAATTTGCTTGGAAAGGAGTATTTTCTTCACGCTTATGGTCCTATATATGTTCTTTCTGCTGATGTTGTCTCAAGCTTGGTTGCTCTTAGGAATGACAGTTTCCGGATGTTCAGCAATGAGGATGTTACTATTGGAGCTTGGATGCTAGCTATGAATGTCAACCATGAGAATAATCATGAACTTTGTGCTACAGACTGTACAGCCACATCTATTGCTGTCTGGGATATTCCAAAGTGCTCAGGCCTCTGTAATCCAGAAAAGAAAATGTTGGAACTCCATCAAAAGGAGATCTGCTCTAAGACCCCAACTCTGGAATCAGATGATGAATAG 1041 0.4678 MPSSPKSYALPYVRYQSPFATRRSTAFLLGLSALLLLLFFFAISSFLAQIRNNRCVNAHPRSVRVVWEHAGNPNTAVGVGDAERHKVMGFVGIQTGFGSGGRREALRKTWFPSDRQGLHRLEEATGLAFRFIIGRTSDRAKMSALQKEVAEYDDFILLDIQEEYSKLPYKTLAFFKAAYAFFDAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSNLLGKEYFLHAYGPIYVLSADVVSSLVALRNDSFRMFSNEDVTIGAWMLAMNVNHENNHELCATDCTATSIAVWDIPKCSGLCNPEKKMLELHQKEICSKTPTLESDDE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00552 346 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 75 303 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst11g00552 346 FunFam Hexosyltransferase 86 317 - -
Spst11g00552 346 Gene3D - 90 319 - -
Spst11g00552 346 Pfam Galactosyltransferase 102 295 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00552 Spst-Chr11 27508234 27514390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00552 16 346 Glycosyltransferase AT1G53290 71.726 0.0 506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00552 11 27508234 27514390 Spst11g00552 11 27508234 27514390 ECH
Spst5g01311 5 26894166 26899493 Spst11g00552 11 27508234 27514390 PCT