Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00533 ATGAGGGAGGAAGAGATCGAGAAGCTCCGAGGAGTTGTACGCGACTGCGTGAGCAAGCACCTCTATTCCTCCGCCATCTTCTTCGCCGACAAAGTCGCCGCCTTCACCGCCGACCCTGCTGACATCTACATGCAGGCGCAGGCGCTCTTCCTCGGCCGCCATTATCGTCGCGCCTTCCACCTCCTCAATGCTTCAAAAATTGTCCTCAGCGACCTCCGATTCCGCTACCTCGCCGCCAAGTGCCTCGAAGAATTGAAGGAGTGGGATCAGTGCCTTTCGATGCTGGGTGAGGCTAAAGTGGATGACGAGGGGAATGTTTCTGATACGAAGGACTCAAATGTTATGTACTTAGATAAAGATTGTGAAGATCGTGAAATCAACATATCTTCTGCAATATGCTTCTTAAGAGGAAAAGCATACGAGGCTTTAGAAAACCGTGCCCAGGCCAGACTGTGGTATAAAGCTGCTATAAAAGCGGATCCTTTATGTTATGAGGCTTTGGAATGTCTTATTGAGAATCACATGCTTACATGCCAGGAAGAAGCAAATTTGATCTCGTCATTGCAATTTGGTAGTGAGGATGGATGGCTCTCATCATTTTATTCTTGTCTGATAAAGAAGTATGACAAAGAAAATGTTGTAGAAGCCAAGTTCAGAGAACTTGAGAATGAAAGCTGTAAAAGTGACCAATCTGATACTTCTTTCTTGCGCTCACTGAAATCCAATACCGATCTATTGGCTTGCAAAGCTGAATACTATCATCAGTGTGGTGAATATCAGAAATGTTTTGACTTAACATATGTTTTGCTTGAGAAGGATCTTTTCCATCTAAAGTGTACGTTAGTACATCTGGCAGCTGCTGTTGAACTTGGGCATTCAAATGAACTCTATTTGATGGCATGCAATTTGGTGAAGGATTATCCGCAGATGGCTTTATCATGGTTTGCTGTTGGTTGCTACTATTATTGTATCAAGAAGTATGATCAATCCCGTCGATATTTTAGCAAGGCAACTAGTCTAGATGGAACATTTCCCCCTGCATGGATAGGCTATGGAAATGCTTATGCTGCTCAAGAAGAAGGTGATCAGGCTATGTCAGCCTACCGCACTGCAGCTAGATTGTTTCCTGGGTGTCACTTACCAACTCTTTACATTGGAATGGAATGCATGCGGACCCACAGCTATAAGCTTGCAGAACAGTTTTTTATACAGGCCAAGTCAACTTGTCCCTCAGATCCACTTGTGTATAATGAACTTGGAGTTGTTGCCTATCATATGAAAGAGTATAAGAAAGCTGTGTGGTGGTTTGAGAAAACATTAGCATTGATACCAACCGCTTTATCTGAAATGTGGGAATCGACTGTAGTCAATCTTGCCCATGCATACAGAAAATTGAAGATGTACCGAGAAGCAATTTCTTTCTATGAGAAAGCACTTGCATTATCAACGAGAAGTGTGAGCACTTATGCTGGTCTTGCATACACTTACCACTTACAGATAGTGTGTAAAGACTGA 1515 0.433 MREEEIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTADPADIYMQAQALFLGRHYRRAFHLLNASKIVLSDLRFRYLAAKCLEELKEWDQCLSMLGEAKVDDEGNVSDTKDSNVMYLDKDCEDREINISSAICFLRGKAYEALENRAQARLWYKAAIKADPLCYEALECLIENHMLTCQEEANLISSLQFGSEDGWLSSFYSCLIKKYDKENVVEAKFRELENESCKSDQSDTSFLRSLKSNTDLLACKAEYYHQCGEYQKCFDLTYVLLEKDLFHLKCTLVHLAAAVELGHSNELYLMACNLVKDYPQMALSWFAVGCYYYCIKKYDQSRRYFSKATSLDGTFPPAWIGYGNAYAAQEEGDQAMSAYRTAARLFPGCHLPTLYIGMECMRTHSYKLAEQFFIQAKSTCPSDPLVYNELGVVAYHMKEYKKAVWWFEKTLALIPTALSEMWESTVVNLAHAYRKLKMYREAISFYEKALALSTRSVSTYAGLAYTYHLQIVCKD 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00533 504 Pfam Tetratricopeptide repeat 132 161 IPR019734 GO:0005515
Spst11g00533 504 ProSiteProfiles TPR repeat profile. 345 378 IPR019734 GO:0005515
Spst11g00533 504 SUPERFAMILY HCP-like 313 497 - -
Spst11g00533 504 SUPERFAMILY TPR-like 41 174 IPR011990 GO:0005515
Spst11g00533 504 ProSiteProfiles TPR repeat profile. 413 446 IPR019734 GO:0005515
Spst11g00533 504 Pfam Anaphase-promoting complex, cyclosome, subunit 3 19 97 - -
Spst11g00533 504 ProSiteProfiles TPR repeat profile. 452 485 IPR019734 GO:0005515
Spst11g00533 504 Gene3D Tetratricopeptide repeat domain 5 500 IPR011990 GO:0005515
Spst11g00533 504 ProSiteProfiles TPR repeat profile. 311 344 IPR019734 GO:0005515
Spst11g00533 504 SMART tpr_5 345 378 IPR019734 GO:0005515
Spst11g00533 504 SMART tpr_5 379 412 IPR019734 GO:0005515
Spst11g00533 504 SMART tpr_5 130 163 IPR019734 GO:0005515
Spst11g00533 504 SMART tpr_5 452 485 IPR019734 GO:0005515
Spst11g00533 504 SMART tpr_5 413 446 IPR019734 GO:0005515
Spst11g00533 504 SMART tpr_5 311 344 IPR019734 GO:0005515
Spst11g00533 504 PANTHER CELL DIVISION CYCLE 16,23,27 22 498 - -
Spst11g00533 504 Pfam Tetratricopeptide repeat 415 481 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00533 328 499 Glycosyltransferase AT3G04240 26.163 3.81e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00533 11 27268954 27278034 Spst11g00533 11 27268954 27278034 ECH