Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02371 ATGAAACCTAACTTTGATCTTGAAGTGGAGGCCTCAGCAGAATATGATACTGAAGTTAGCAGCCAGGTTGCTTCCAATATATCTGAAGGTCCTTGTAGTGATAGCCTCACTAACTCTTCTAACATCACAAATCCAAATACTATCTCACTTGACTTAACTCTCAACTTAAACAATAATGACTTGGTAGCTAGAGATTCAGCAGGATTCTCATTCTCAAGCACAAGTGAGAGCAGCAATGAACCAACTATCTCAAGAGTTTTCTTTTGCAATTACTGTCAGCGTAAATTTCTTAGCTCACAGGCTCTTGGTGGCCACCAAAATGCACACAAGAGAGAAAGGACATTAGCAAAGCGAGCTATGAGAATGGGGTTTTTATCTGAGAGGTATTCTAGTCTAGCATCTCTCCCTCTTCATGGTTCTTTTAGGTCCTTAGGGATAAAGGCACACTCTTCACTGCACCATGGTTTTCCACCAACAATAAGGCCTCCTCCTCCTAAGTTGAAAAGCAATGCAAGATTTGAGCAAGGATATCTTGGTCTTCCAATATTCTGGAAGGATGATGAGGCAGAACTGTTGTGGCAAGGTAGTTTTCATCAGGTTCCTGAGGGAGGTAGTAATACTCATCAGAATTTCATACTGACTGAAAGTTCAAATTTAAGTTTTACTGAGGTGAATCCACCAGTTGAGAATTCCATACCTGAATTAACATTGAAACTTTCGTCATCCTCTTCCTCGCTACCGTCATCATCCTCTTCCTCGCCACCACCGTCATCTCCGCGGCCCCCTCCGCCGCATCCGAAATCTAACCTACGCGATCCGTTTGAGGAAAATCCATCATCTCCGGAGCGAACTTACTTCGAACGAAGATCGATCAAGAGAGTGCGAAAGGAACTCAGGCAAGACAAATCCCTCCTCCACGGCTTCAAACTCCAACCACACGCCGCTGACCTCCTCGAATCCATCGACCTCTCCTCACTGCAAGACGCAATCCAAAACTACGCCTTAACCAAGAATCCCTCCAACAAAACCGTTTTCAATTCCCTCGCTTACAATTACCCTAATTCCTTTTCATTCAAGCTGGCCAAACTCATCCAACGCCACCCTCCCCTCCTCATCCGAACCGAATCTGTCTCTCTCCTCCGCAGCACAATCACCGACATGAGAAGAAAAGTCAGTTTAGCAATGCTCAACGAACTCAAAGAACCTCTCCTCCACTCCATCAAGGTAGAACCCGTCCAATCTTTGCTCCCTGCGCTCTGCGAAATCATCGGAAACGTCGCTTCTAGAATCTACAATTATCCTTTAGGTGACTGGCTAGAGCTTCTTGAGTACATTTACTCCTGCATTATCGGTGACACGTCATCGGAGAATACGAAAGGGCTCATGCTATTAGCAGAACTGCCTGTTGAATCTGCTGAAAACAGAGCGTTCTGGGACGAGCAGGGGAACTACGACACGCTATTCGGGATTATCTTGATGTTAACGGATTCACCAGATGATGAATTGCATGCGTTAGCAATGGATGCCTCGATGACGCTGATGGGAATGTCGAAGAATCTTGGGAGACCCGGAGTGTGCGATTATCTTTTGCCTTTACTATTTCAATTCATCGATCGGAACGGGAAAGAAGAGGCGTTGGTGTTGGACAGGGTTCGGCGGTTGGTGGATTTGGTTACGCTGAATGTTGGTGAAATCTTCCAAGGGAGAGAAAGTGACTTGTTTCATTGCATGCTTCGGCTCGCGGAGAAGGAAGGTGTGAGTGAGGAGGTGAGGTGTTCGGCGGTGGTTGTTATGAAGGAGCTTGATGAGGTGAACATGGACGCGATGCACGAATTGGTAAAAAACCTGCCTCAACAGGACGTGAAGAGGCTGCTTGGGGTTTCTATGGAGATGATGTCGTGTGTTTTAGAGTCCCCTACTTGGCATGAAGTGGACGAAAAGAAGTGTCATGAGCTTGGGTTGACAGAGACTTTCAACAGTGGGAAGTTCTTGCTAAATTGGCTCTCTTTTGAAGGGAATGAGAGTGTGGTGATTCCCACCGCACTTGAGATTATAACAGGGACTTATGCAGGTCATGAGGATTGGCGGAAACGTCATGCTGCAATGATTGCCCTTGGTACAGTTGCAGAGGGACAAAAAAAGGTATATGACATTGTTGTGCGCTTTAATCAAATTGAGAAACTGGTCCTTATGTTACTCAATAATGATATGCATCCCCGAGTAGTTTGGGCTACAATACATGCAATTAGGTGTTTGAGCGAATATAAGGAGCTACTAGTGCGTACCCAATGTCATGTGAAGATCTTGAATCGACTAGTTACCCTCACTGGCTTTAGCCTTTGTCCCCGTCTACAGGCATATGCTGTTATAACCATTCGTTACTTGGTTACAAATTGTGGCTTAGACAACTTGGCTTCTTTAGCAGAAAAAATTGTAACATCATTGCTTTCACTTCTTAAGGATGACAGGCAGAGGTTACAGGAAGAAGCTGCGGAAACCCTGAAATCAATTGCACTTACAATACCGGCTACTTTTCGTGAACATCATTACGAGAGAACAATTGAATCACTGGAAGCCATTGTGTTTGCCAACTATCGTAGACCCAAATTGTTGCTCCGAGCCAAATGTCTAGAATGCATTAGTAGTATTGTGAGGAAAGTTGAACAAGACAAGTTCAAAGGAGAGGAAGCGGATGATGTCATGGAGGCTCTACTAAAACTAGATGAAAGACTGAAAGATACTGATTACTTAGCAAAAAGTCTCATCTTAAAGGCACTGGATCAATTATGTCGATGCCAAGCAGTGCAACAGCAATTTCACAAATTTATCGATAGAATGATGCCGATGTTGCTTGAATCTGCTGAACTTGATATTGACTTAAAAGATGAGGATGACAGCCTAGATGATACCAGGTATTTGATCGAAACTGTGAGAGTTCGGGCTTGTAATATATTGGCATACTGTGCTGTTCGATCACCGCCAAGATTTTCCAATGACATTTTCAAGGTCTCTAATCTTTTTGTGGGCTGGCTTGATTGTTCTAGTTTTGAAACTAGAAAGGCTTGTATTTCAGGTCTTCCTAGCCTATTGGTCGTAGTTAAATTAGGTATCCAAGATCCACCGTCCCAAAGAGCTTTGACTTCCCTCATTGTAAAACCTCTGGTTCAGGCATTAAATAAAAAGGATTATGATAGTGGTTTGCTTTTAAGCATGTTGAAGTCACTACCCAAGTGCATTCAGACCTCTGGTCCATTTATCCTTAGTCACCTAATCCAGATGATTTCCGAGGAGATAAGCCGATTAGTAGATAACATTGTTGAAATGGAACTTTTAGCACAATCATCTGAAAGTGATGACAGCGAAAGTGACGAAGATGTACCAATGGAAGAAATAGTTCGGGAAACAAAGCTTTTCATAACAGTAACAATGGAAACATTTGGCTCTCGATTCTTGCCATACGTTGATAGCCTTATGTCAAATGTAGAAAAGTATATGGATGATAATTTCCCAGATAAAGTGAAAGCTTTGGCAATTTCCGTTTACAACCTTATTTTACCACATTTCCCAGAAAAACCGACGCATCTTAATAAGTATATTTGTTTCCTCTTGCAAGTTTTGAGGGATGCAAATCATCTTTATGCCCGGCCGGTAGCTGCACAGGGGGTTGGTATCTGTGCTATGTTTGGAGGAGCTAGATTCAGACCTCTGGCTATAGTGTCTATGTCACGTCTATGCAGTGTAATAATAGATGAAAGATTTTCAACTAGGACAAGGTTATATGATACGACAGTTGCAGCTCTTGGGAAAATTTGTGAATTTCAGCGTGAATATATTCGAGGCCCAAAGACATTGAGCCTTGAGTGCATATAG 3870 0.432 MKPNFDLEVEASAEYDTEVSSQVASNISEGPCSDSLTNSSNITNPNTISLDLTLNLNNNDLVARDSAGFSFSSTSESSNEPTISRVFFCNYCQRKFLSSQALGGHQNAHKRERTLAKRAMRMGFLSERYSSLASLPLHGSFRSLGIKAHSSLHHGFPPTIRPPPPKLKSNARFEQGYLGLPIFWKDDEAELLWQGSFHQVPEGGSNTHQNFILTESSNLSFTEVNPPVENSIPELTLKLSSSSSSLPSSSSSSPPPSSPRPPPPHPKSNLRDPFEENPSSPERTYFERRSIKRVRKELRQDKSLLHGFKLQPHAADLLESIDLSSLQDAIQNYALTKNPSNKTVFNSLAYNYPNSFSFKLAKLIQRHPPLLIRTESVSLLRSTITDMRRKVSLAMLNELKEPLLHSIKVEPVQSLLPALCEIIGNVASRIYNYPLGDWLELLEYIYSCIIGDTSSENTKGLMLLAELPVESAENRAFWDEQGNYDTLFGIILMLTDSPDDELHALAMDASMTLMGMSKNLGRPGVCDYLLPLLFQFIDRNGKEEALVLDRVRRLVDLVTLNVGEIFQGRESDLFHCMLRLAEKEGVSEEVRCSAVVVMKELDEVNMDAMHELVKNLPQQDVKRLLGVSMEMMSCVLESPTWHEVDEKKCHELGLTETFNSGKFLLNWLSFEGNESVVIPTALEIITGTYAGHEDWRKRHAAMIALGTVAEGQKKVYDIVVRFNQIEKLVLMLLNNDMHPRVVWATIHAIRCLSEYKELLVRTQCHVKILNRLVTLTGFSLCPRLQAYAVITIRYLVTNCGLDNLASLAEKIVTSLLSLLKDDRQRLQEEAAETLKSIALTIPATFREHHYERTIESLEAIVFANYRRPKLLLRAKCLECISSIVRKVEQDKFKGEEADDVMEALLKLDERLKDTDYLAKSLILKALDQLCRCQAVQQQFHKFIDRMMPMLLESAELDIDLKDEDDSLDDTRYLIETVRVRACNILAYCAVRSPPRFSNDIFKVSNLFVGWLDCSSFETRKACISGLPSLLVVVKLGIQDPPSQRALTSLIVKPLVQALNKKDYDSGLLLSMLKSLPKCIQTSGPFILSHLIQMISEEISRLVDNIVEMELLAQSSESDDSESDEDVPMEEIVRETKLFITVTMETFGSRFLPYVDSLMSNVEKYMDDNFPDKVKALAISVYNLILPHFPEKPTHLNKYICFLLQVLRDANHLYARPVAAQGVGICAMFGGARFRPLAIVSMSRLCSVIIDERFSTRTRLYDTTVAALGKICEFQREYIRGPKTLSLECI. 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02371 1289 MobiDBLite consensus disorder prediction 252 268 - -
Seca6g02371 1289 Pfam Importin repeat 6 1068 1166 IPR041389 -
Seca6g02371 1289 Gene3D - 325 1286 IPR011989 -
Seca6g02371 1289 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Seca6g02371 1289 Coils Coil 816 836 - -
Seca6g02371 1289 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Seca6g02371 1289 MobiDBLite consensus disorder prediction 238 288 - -
Seca6g02371 1289 PANTHER IMPORTIN BETA 338 1278 IPR040122 GO:0006606
Seca6g02371 1289 MobiDBLite consensus disorder prediction 269 288 - -
Seca6g02371 1289 SUPERFAMILY beta-beta-alpha zinc fingers 85 114 IPR036236 -
Seca6g02371 1289 SUPERFAMILY ARM repeat 1045 1273 IPR016024 -
Seca6g02371 1289 SUPERFAMILY ARM repeat 350 1125 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02371 Seca-Chr6 85831137 85845113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02371 81 239 C2H2 Transcription Factor Family AT1G66140 50.270 2.38e-40 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02371 6 85831137 85845113 Seca6g02371 6 85831137 85845113 ECH