Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01690 ATGGGTTCATTCCAGACACCAATTGGAATGAGAAGCTCCACATTGCTAGAAACTTCATGTGGATTCCTGTTACAGGAACTGCAGATAATATGGGATGAAATTGGAGAAGATAAGTTTGAGAGGGAGAAGGTTCTGCTGGATTTGGAGCAAGAATGCCTTGAAGTTTACAGAAGAAAAGTTGACAAAGCAAATACCTCTAGAGCTTGTCTGCATCAAGAATTGGCCGAGGCAGAGGCTGAATTTACTCACCTTCTTCTGTCCCTTGGTGAACGATCATTACCTGGACGGCCAGAGAAAAGGGCGGGTACACTAAAAGAGCAGCTAGATTCAATCACTCCAGCACTCCGGGAGATGCGCTTGAGGAAAGAAGAAAGGTTAAACCAATTCAGAGCTGTGCAAGGGCAGATTCAAAAAATTTCTGCAGAAATTGCAGGAAACTCGGAAAATGCACCCTCAGTTATTGTAGTAAACGAGAATGATCTTTCACTAAAAAGACTTGAGGAGTATCAGAATGAGTTGCAAAGGCTCTACAATGAAAAGAATGAAAGACTCCAGCAAGTGGAGAAATATATAGACAAAATACACAGCTTGTCCACAATCTTGGGAAAGGATTCCTCTGCGATCATCACGGAAGTTCATCCAAGCTTGAATGATTTGTGTGGAATAACAAAAAATATAAGTGACACTATCCTGGATAAACTCAATACCACAGTGGAGTCCCTTTTTGAAGAAAAGCAAAATCGGCTGGACAAGCTTCACCATTTAGGCAAAGCATTATCAAATCTATGGAATCTAATGGACACACCATATAGTGATCGGCAATCCTTTTGCCATGTAATCAATTTGTTGTCACGCTCATCGGCGGAAGTATCAGATCCTGGAAGCCTTACTCTAGAAATAGTCCAGCAGACTGAAGCTGAAGTAAAGAGACTGGATCAATTAAAAGCAAGCAAGATGAAGGAGCTATTCCAGAAAAAGCAGGAGGAATTGGAGTTAATATGCAAGAAATCACATGTGGAGATTCCTTCACGGACAGAGATGAACAATATAATCAGCCTCATAAACTCAGGGGAGATTGACCATTCCGATCTCCTCATGAGCATGGATGAACAGATATCAAGAGCAAAAGAAGAGGCTGCCAGCAGGAAGGCTATAATGGAGAAAGTGGAGAAGTGGATGTTAGCACGAGATGAGGAGCGGTGGCTAGAAGAATATAGCAGGGATGAGAATCGATACTCAGTCAGTAGAGGAGCTCACAAAAACTTGAGACGTGCTGAACGTGCCCGTATAATGGTCAGCAGAATGCCAGCTCTGGTAGATTTGCTAATAAAAATGACTAGGAGTTGGGAAGAAGAAAGAAATAAAGTTTTCCTATATGATCAGGTACCTCTTATGGAAATATTAGAAGAATATAATGTACTAAGGCAAGAAAAGGAGGAGGACAAGAAAAGACAGCAGTCATGGGAAAAGAAGAAGGTTCAGAGCCAAGTAGCTGTTGAGCGAGACAATACATATGCATCACGACCAGGTACCAGCAGTAGGCGTCTTCCAACTAGAAGCTTGAATGGAGGTCTTGACAGTGCTATGTCCCCTCTGAACAGAAGGCTTCCTATGGGTATCCAACAACTGGGATCAAACAGCATAAATTCAGGAAGTCATGGCATATCCTTCATTAAGGATGGAAGGAAGATACAAAGAAAAAAGATTTTTGGCGAACCTGCCTTTATTTATGATGCATCTTCTGTGGTGTCAACACATTCAGGACCATTTTCTCCTTGA 1779 0.4193 MGSFQTPIGMRSSTLLETSCGFLLQELQIIWDEIGEDKFEREKVLLDLEQECLEVYRRKVDKANTSRACLHQELAEAEAEFTHLLLSLGERSLPGRPEKRAGTLKEQLDSITPALREMRLRKEERLNQFRAVQGQIQKISAEIAGNSENAPSVIVVNENDLSLKRLEEYQNELQRLYNEKNERLQQVEKYIDKIHSLSTILGKDSSAIITEVHPSLNDLCGITKNISDTILDKLNTTVESLFEEKQNRLDKLHHLGKALSNLWNLMDTPYSDRQSFCHVINLLSRSSAEVSDPGSLTLEIVQQTEAEVKRLDQLKASKMKELFQKKQEELELICKKSHVEIPSRTEMNNIISLINSGEIDHSDLLMSMDEQISRAKEEAASRKAIMEKVEKWMLARDEERWLEEYSRDENRYSVSRGAHKNLRRAERARIMVSRMPALVDLLIKMTRSWEEERNKVFLYDQVPLMEILEEYNVLRQEKEEDKKRQQSWEKKKVQSQVAVERDNTYASRPGTSSRRLPTRSLNGGLDSAMSPLNRRLPMGIQQLGSNSINSGSHGISFIKDGRKIQRKKIFGEPAFIYDASSVVSTHSGPFSP. 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01690 592 Gene3D - 372 507 - -
Seca6g01690 592 Coils Coil 464 491 - -
Seca6g01690 592 Coils Coil 159 193 - -
Seca6g01690 592 MobiDBLite consensus disorder prediction 480 528 - -
Seca6g01690 592 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 520 - -
Seca6g01690 592 Coils Coil 301 321 - -
Seca6g01690 592 MobiDBLite consensus disorder prediction 480 497 - -
Seca6g01690 592 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 16 553 IPR007145 GO:0000226|GO:0008017
Seca6g01690 592 MobiDBLite consensus disorder prediction 498 527 - -
Seca6g01690 592 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01690 Seca-Chr6 71353326 71358407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01690 12 531 EF-hand Containing Proteins AT5G62250 37.996 2.15e-96 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01690 6 71353326 71358407 Seca6g01690 6 71353326 71358407 ECH