Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09462 ATGACAAAGGAATTCAACAACCAAGCAGAGGTTTGTGTGGGGTTGGAAACCCTGTGGCAAGCTTTGTCCAAGGATTTAACAGTGGTAATCCCAAAGGTTATACCAAATGTTGTGAAAGATGTGAAAGTGATCGAAGGTGATGGAGGAATTGCCATGGTAAAGGAATTCAGTACCCAAACAAAGGTAAGTGTGGGGTTGGAAACCATCTGGGCAGCTCTGTCCAAGGATTTCATTTTCATAGTTCCAAAGGTTCTCCCAAATATTGTGAAAGATGTGCAAGTGATCGAAGGTGATGGTGGGGTTGGTACAATCCTCATCTTCAATTTTTTGCCTGGTGCATCCTCAGGAAGTTACCAGAGGGAGAAGATCACAGAGTTTGATGAGTTATCCCATGAAATTGGGCTGCAAGTGACTGAAGGAGGCTATCTGAATCAAGGATTGTCATATTACAAGACAAATTTTCAATTATCTGCAATAGGAGAGAATCAGACTCTGGTCAACGTGAAGATCTCTTATGATCATGAATCTGACATAGAAGAAAAAGTCAAACCAACAAAGACATCAGAGTCTACTTTATTCTATCTTAGGCGCCTAGAAAGTTATCTCATTAATGGCGCTTGA 621 0.4106 MTKEFNNQAEVCVGLETLWQALSKDLTVVIPKVIPNVVKDVKVIEGDGGIAMVKEFSTQTKVSVGLETIWAALSKDFIFIVPKVLPNIVKDVQVIEGDGGVGTILIFNFLPGASSGSYQREKITEFDELSHEIGLQVTEGGYLNQGLSYYKTNFQLSAIGENQTLVNVKISYDHESDIEEKVKPTKTSESTLFYLRRLESYLINGA. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09462 206 PRINTS Major pollen allergen Bet V1 signature 117 136 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca4g09462 206 PRINTS Major pollen allergen Bet V1 signature 76 86 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca4g09462 206 PRINTS Major pollen allergen Bet V1 signature 100 109 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca4g09462 206 PRINTS Major pollen allergen Bet V1 signature 194 204 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca4g09462 206 PRINTS Major pollen allergen Bet V1 signature 53 73 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca4g09462 206 PRINTS Major pollen allergen Bet V1 signature 136 149 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca4g09462 206 Pfam Pathogenesis-related protein Bet v 1 family 52 203 IPR000916 GO:0006952
Seca4g09462 206 FunFam Phytohormone-binding protein CSBP 52 206 - -
Seca4g09462 206 SUPERFAMILY Bet v1-like 5 57 - -
Seca4g09462 206 Gene3D - 1 49 IPR023393 -
Seca4g09462 206 Gene3D - 50 206 IPR023393 -
Seca4g09462 206 PANTHER - 54 204 - -
Seca4g09462 206 CDD Bet_v1-like 54 202 - -
Seca4g09462 206 SUPERFAMILY Bet v1-like 55 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09462 Seca-Chr4 224110181 224113932 Dispersed/Tandem