Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca4g08199 | ATGAATATGTCAAGGAAAGGAAAAGACATAGCTGAAGGATCATCAACAACAACAACAAGATCTTCTTCTTCAGATCAACAACAGCCTCTGAGCAGATATGAATCTCAAAAGAGGAGAGATTGGAACACTTTTGGACAGTACTTGAGGAACCAAAGGCCACCAGTGGCACTTTCACAGTGCAATTCAAATCAAGTGCTTGATTTCTTAAGGTACTTGGATCAATTTGGGAAGACAAAAGTGCATGTACAAGGGTGTGTTTTTTTTGGTCAAGTTGAGCCACCAGGTCCTTGTACTTGTCCACTTAGACAAGCTTGGGGAAGCCTTGATGCTCTCATTGGAAGGTTAAGAGCTGCTTATGAAGAAAATGGAGGGTTGCCTGAGTCAAATCCATTTGCTAGTGGTGCCATAAGAGTTTATCTTCGTGAGGTTAGGGACTCTCAAGCTAAGGCAAGAGGGATCCCTTATAAGAAGAAAAAGAAGAAGAGGAATCTTATCAAGCCCAACGGGGACACCTCAAACTTACCTATGCAGTGA | 534 | 0.4232 | MNMSRKGKDIAEGSSTTTTRSSSSDQQQPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCNSNQVLDFLRYLDQFGKTKVHVQGCVFFGQVEPPGPCTCPLRQAWGSLDALIGRLRAAYEENGGLPESNPFASGAIRVYLREVRDSQAKARGIPYKKKKKKRNLIKPNGDTSNLPMQ. | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca4g08199 | 177 | ProSiteProfiles | ALOG domain profile. | 32 | 159 | IPR006936 | - | |
| Seca4g08199 | 177 | MobiDBLite | consensus disorder prediction | 150 | 177 | - | - | |
| Seca4g08199 | 177 | MobiDBLite | consensus disorder prediction | 9 | 31 | - | - | |
| Seca4g08199 | 177 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
| Seca4g08199 | 177 | PANTHER | PROTEIN G1-LIKE2 | 17 | 163 | IPR040222 | - | |
| Seca4g08199 | 177 | Pfam | ALOG domain | 23 | 145 | IPR006936 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca4g08199 | Seca-Chr4 | 194526863 | 194527396 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Seca4g08199 | 4 | 194526863 | 194527396 | Seca4g05766 | 4 | 110271779 | 110272306 | PCT |