Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08188 ATGCCTTCCTCCCCCAAGTCCTACTACCGTCCCTCTGCCACCTTCTCCTCTCGCAGATCCACCGCCCTTCTCCTCCTCTCCTTCCTCCTCCTCCTCTCGATCGCCACTCTACTCATTCTCCGCCCTAGTCAAGGGTATCGCTGCCTCAACCCCCATCCCAGATCGGTTAGGGTCGTTTGGGAACACGCCGGCACCACATCTACCTCCGGCAATGGGGGTTCCAATAGCAATAGGCATAAGGTTATGGGTTTTGTGGGTATTCAGACGGGCTTCGGATCTGTCGGTAGGAGAGAAGCGTTGAGGAAGACTTGGTTCCCCTCCGATCGCCAAGGGCTAGAACGCTTGGAAGAAGCCACTGGGTTGGCTTTTAGGTTTGTCATTGGTAGAACAAGTGATAAAGCAAAGATGTCTGCACTTCAGAAGGAAGTAGCAGAATATGATGATTTCATTCAGTTGGATATCCAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTAGCTTTCTTCAAAGCTGCTTATGCTCTTTTTGATGCTGAGTTTTATATCAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTTTCATTACTATTAGCAAAAGAGCGATCTCACCCGCAGACCTACATAGGATGCATGAAAAAGGGACCTGTTTTCACTGATCCAAAACTCAAATGGTATGAGCCACTGTCACATTTGCTTGGAAAGGAGTATTTTCTTCATGCTTATGGTCCTATATATGCTCTTTCTGCTGATGTTGTTTCAAGCTTGGTTGCTCTTAGGAATGATAGTTTCCGGATGTTCAGCAATGAGGATGTTACTATTGGAGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATAATCATGAACTTTGTGCTCCAGACTGTACAGCCACATCTATTGCTGTGTGGGATATTCCTAAGTGTTCAGGCCTCTGTAATCCAGAAAAGAAAATGTTGGAACTTCATCAAAAGGAGAGCTGCTCTCAGAGCCCAACCCTGGAATCAGATGATGAATAG 1023 0.4604 MPSSPKSYYRPSATFSSRRSTALLLLSFLLLLSIATLLILRPSQGYRCLNPHPRSVRVVWEHAGTTSTSGNGGSNSNRHKVMGFVGIQTGFGSVGRREALRKTWFPSDRQGLERLEEATGLAFRFVIGRTSDKAKMSALQKEVAEYDDFIQLDIQEEYSKLPYKTLAFFKAAYALFDAEFYIKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSHLLGKEYFLHAYGPIYALSADVVSSLVALRNDSFRMFSNEDVTIGAWMLAMNVNHENNHELCAPDCTATSIAVWDIPKCSGLCNPEKKMLELHQKESCSQSPTLESDDE. 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08188 340 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 75 297 IPR002659 GO:0006486|GO:0016020|GO:0016758
Seca4g08188 340 FunFam Hexosyltransferase 80 311 - -
Seca4g08188 340 Gene3D - 78 310 - -
Seca4g08188 340 Pfam Galactosyltransferase 96 289 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08188 Seca-Chr4 194140948 194149602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08188 4 340 Glycosyltransferase AT1G53290 70.435 0.0 512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08188 4 194140948 194149602 Seca4g08188 4 194140948 194149602 ECH