Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06935 ATGTCTCTTCCACCCATAGAGTGTGTATACGTAACAGAGGACTGTGTTCGGGAATGGAGGAGTGGCAACCCTGCCCTCAAGGTCTCCGAACCCGTCCCAATGCTTCGCTTCCTCTACGAGCTCTGCTGGACTATGGTTCGGGGTGAATTGCCGTTTCAGAAGTGTAAAGTAGCATTAGATTCTGTCATATTCTCAGATAAAGCTTCGGCCGATAAAATAGCCTCAAATTTTGCAGATATAGTGACTCAGATGGCTCAAGATCATACAATGTCAGGAGAGTTCCGTTCTCGTCTCATTAAACTGGCAAAGTGGCTTGTGGAATCTGAATTGGTTCCAGTTAGGCTACTTCAGGAACGTTGTGAGGAAGAATTTTTGGGGGAGGCTGAGTTGATCAAAATAAAGGCTCAGGAGTTGAAAGGAAAAGAGGTCAGAGTAAATACACGACTTCTTTATCAGCAAACCAAATTCAACCTTCTCAGAGAAGAGAGTGAGGGCTATGCAAAACTGGTTACTCTTCTTTGTCGGGACTCTGAAGCGCCAACTCAGAAAGCATCTGCACCAACAATTGGCATTATTAAGTCATTAATTGGCCATTTTGATTTGGATCCAAATCGTGTATTTGATATTGTCCTTGAGTGTTTTGAACTTCAGCCCAACAACAATGTGTTTATAGAGCTGATTCCTATTTTTCCTAAGTCTCATGCTTCACAGATTCTTGGATTTAAATTTCAATATTATCAACGCATGGAAGTCAGCAATCCTGTTCCATTTGGGCTCTATAGACTGACAGCATTGCTGGTGAAGCAAGATTTTATTGATCTTGATGGCATATACGCTCATCTACTCCCCAAAGATGATGAAGCATTTGAGCAGTATAACACTTTCTCTTCCAAGCGCCTTGATGAGGCCAATAAAATTGGGAGAATAAACCTTGCTGCCACCGGAAAAGATCTAATGGATGATGAGAAACAGGGGGATGTCACCATAGATCTCTTTGCTGCTTTAGACATGGAAACTGATGCAATTGAAGAGCGAATGTCTGAGCTTCAAAACAGTCAAACTTTGGGCTTGCTAACCGGTTTTCTTTCAGTGGATGACTGGTATCATGCACATATACTATTTGAACGCCTCTCACCACTCAATTCAGTGGAACATGTCCAAATATGTGATAGCTTGTTTAGGCTTATTGAGAAGTCAATTTCTTCAGCATATGATGTTATTCGTCGAGCACATCTTCAGAACCCGGGATCATCAGCAGGAGCCAGCACTGATGCTATGGATATAGATAACTCTTCAGGACATGGTTCTTTCATAGATCTTCCAAAGGAACTTTTTCAGATGCTTGCTTGTACTGGACCTTATCTCTATCGTGATACTATGTTGTTGCAGAAGGTTTGTAGAGTGTTGAGAGGCTATTTCCTTTCTGCTCTTGGGCTTGTAAATCGTGGTGATGGTGCCTTGAATCCTCAATCTCATGTTATTGGAAATCCTCACCTACACCTTAAGGAAGCAAGGCTAAGGGTGGAGGATGCTTTAGGAGCATGTCTACTACCTTCTCTACAGTTGATTCCTGCCAATCCAGCGGTTGGCCAGGAAATTTGGGAACTAATGAGTCTCCTTCCTTATGAGGTACGATATCGTTTATATGGTGAGTGGGAAAAAGATGATGAGCGCAATCCTATGCTCTTGGCTGCAAGACAAACTGCCAAGTTGGACACTAGACGTATATTGAAACGGCTGGCAAAGGAAAATTTGAAGCAGCTGGGTCGGATGGTTGCAAAATTAGCTCATGCAAACCCTATGACTGTCCTTCGAACAATTGTCCACCAGATTGAGGCATACAGGGACATGATTACTCCTGTGGTGGATGCATTTAAGTATTTGACTCAGCTCGAATATGATATATTGGAATATGTTGTGATTGAGCGTTTGGCACTTGGTGGACGTGATAAGTTAAAGGATGACGGGCTTAATTTGTCAGACTGGCTTCAATCTCTAGCTTCATTTTGGGGCCACTTGTGTAAGAAGTACCCATCAATGGAATTACGGGGCCTTTTCCAGTATCTTGTGAACCAGTTAAAAAAGGGGCAAGGAATTGAGCTTGTTCTACTACAGGAACTTATTCAACAAATGGCAAATGTCCAGTACACCGAGAACTTGACTGAGGAACAGCTGGATGCTATGGCAGGGAGTGAGACTCTTAGATATCAAGCAACTTCTTTTGGAGTAACTCGCAATAACAAGGCATTGATAAAGTCAACTAGCAGGCTTAGAGATGCATTACTTCCAAAAGATGAACCAAAGTTGGCAATCCCCCTCTTACTGCTCATTGCTCAACATCGATCTCTGGTTGTCATCAATGCAGATGCGCCCTACATTAAGATGGTCAGTGAGCAGTTTGATAGATGCCATGGAACTCTTCTTCAATATGTGGAATTTCTTGGCAGTGCTGTCACACCAGCATCAAATTATGCTAGTCTTATTCCCTCACTCAATGACCTGGTCCACCTTTACCACCTGGACCCTGAGGTTGCTTTCTTGATATATCGCCCTGTGATGAGGCTTTTCAAGTCTCAGAGGAGTCCTTATGTTTGCTGGCCTTTGGATGATAAAAATGCTGCAAGTGATGCATCTATGAACTTTGAGTCTGACCCTGAAGATCATTCTGGTAGTATGGTTCTAGATCTTGGCTCTGGTCAAAATCCTCTAAGCTGGTCATTTCTTCTTGATACTGTTAATACTATGTTGCCTTCAAAAGCATGGAATAGCCTATCTCCTGATCTTTATGCCACATTTTGGGGTCTCACATTATATGATCTGTATGTTCCGAAAAATCGTTATGAGTCGGAAATAGCCAAGCTGCATGCTAATCTCAAATCTTTGGAGGAGCTTTCGGACAATTCAAGCTCAGCAATCACGAAGAGGAAGAAAGAAAAGGAAAGAATTCAAGAATCTCTTGATCGTCTGATCAGTGAACTGCATAAACATGAAGAGAATGTTGCATCAGTCCGGAGACGGCTTTCTCATGAAAAAGACAAATGGTTAAGTTCCTGTCCTGATACCTTGAAGATTAATATGGAATTTCTTCAGCGTTGCATATTTCCACGCTGTACTTTCAGTATGCCAGATGCTGTTTACTGTGCTATGTTTGTCCACACACTCCACTCCCTTGGAACCCCCTTTTTTAACACAGTCAACCACATAGATGTTCTGATTTGTAAGACCCTACAACCAATGATATGTTGCTGCACTGAATATGAGGCAGGCAGGCTTGGCAGGTTTCTGTATGAGACTTTGAAGATTGCTTACTATTGGAAGAGTGATGAATCTATTTATGAACGTGAATGTGGGAACATGCCAGGCTTTGCTGTTTATTACAGATATCCAAATAGCCAACGGGTTACATATGGGCAGTTCATTAAGGTACACTGGAAGTGGAGTCAAAGAATCACGCGGTTACTAATTCAATGTCTGGAATCTAGCGAGTACATGGAAATTAGAAATGCTCTGATAATGTTGACAAAAATTTCTAGCGTTTTCCCTGTAACTCGGAAGAGTGGAATAAACCTTGAAAAGAGGGTAGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTGCTGGCAACTGGTGTTGCAGCAGCTCTGGCTGCTAGGAAGCCTTCTTGGGTTACCGATGAAGAATTTGGTATGGGTTATCTTGAGTTGAAGCCTGCACCATCCATGTCTAAATCTTCAGCTGGAAATTCAGCAACTGTACAAAGTGGGATAAGTCATAATGTCTCTCAAACTGAACCTGCCAGTGGAAAACATTTGGACTCTGGAAACACAGTCAAAGACCAGACAATAAGAACGAAAACTACAGATGGCAAGCCTGAAAGAACTGAAAGCATTACCGCAACAAAGTTTGATTCTGGCCACATAAAACTCAAGGGTAGTTCAATGGCGAATGGATTAGATGCTCAAACATCCTTGCCCGCATCTGTTGGACAATCTGGGACATCAAAATCTGGGGAAAACCCAAAGCAAGCAGAAGAATCCACAAATAGAGCATCGGAAGAGCACACAATAAGAGCTGCTGAGTCAAGAACTTCAGCAAAACGTTCACTGCCTGCTGGTTCACTTTCAAAGGCCTCAAAACAAGATCCTGTAAAAGAGGATGGTAGATCTGGAAAAGCTGTTACTAGAACTTCTGGTTCCTCAAGCAGTGACAAGGATCTTCAAACCCATGCATCAGAGGGAAGACACACTGGAACTACTAATGTATCTTCTGTCAGCGCTAATGGTAACACCGTATCAGGTTCTGCAAAAGGTTCGGCTCAATCAGCAAAGATTCCATATGATGGTCCTGGTAATGAATCAAAGGCAGAGGTTGGAGCTTCCAAGTCTTCTGATATTAGGGCTTCTATGGTAAAGGATGATGGAAATGATATTACTGACTTCACAAGAGGATCCTCTTCTCGTGTAATTCATTCCCCTAGGCATGAAAATACAGGTAATTCAAAGTCTAGTGATAAAATTCAGAAGCGAGCTGGTTCTTCTGATGAACTAGACAGACTAGGTAAACGACGGAAAGGGGATGTAGAACTAAGAGATTTAGAGGGTGAAGTTCGATACTCTGAAAGAGAGAAGCTGATGGAACCTCGATTGGCTGATGACAAATTGGGACCGGATGAACTTGGTCCGTACAGGGCTGGTGATAAGCCATTGGATAGGCCAAGAGACAAAGGCAATGAAAGATATGAAAGGGAACACAGGGAAAGATTGGACCGTCTAGATAAGTCTCGTGATGATTTCATTGTAGAAAAACCGAGGGATAGGTCAATAGAAAGGTATGGAAGAGAACGATCTGTTGAGAGAATGCAAGAGAGGGGTAGTGAGAGGAGTTTCAATAGACTCCCTGAGAAGGCTAAGGATGAAAGAAGCAAGGATGATAGAAATAAATTACGTTACAGTGATGCAACAGTTGAAAAATCTCATGCTGAGGACCGCTTCCATGGGCAAAGCTTGCCTCCGCCACCTCCTTTACCACCAAATATGGTTCCTCAATCTGTTGGTGCTGGGAGGCGTGATGAAGATGCTGATAGGAGGTATGGAGCTACAAGGCATTCACAAAGACTTTCTCCAAGGCATGAAGAAAAAGAACGAAGACGGTCTGAAGAGACTGTGGTTTCTCAGGATGATCCCAAACGAAGAAAAGAAGATGATTTTCGAGATCGAAAACGTGAGGAAATGAAGGTGGAAGAGCGGGAGAGGGAGAGGGAAAGAGAAAAAGCAAATATTCTAAAAGAAGACTTGGACTTAAATGCTGCATCCAAGAGACGAAAACTTAAGAGGGAGCATCTACCAACAAGTGAACCTGGAGAGTACTCACCAGTGGCCCCTCCACCTCCTCCCCCGGGTATTGGCATGTCACAAGCCTATGATGGAAGAGACAGGGGAGACAGAAAGGGACCCATGATCCAACATGCAAGTTACATAGATGAACCGAGTCTTAGGATTCATGGTAAAGAGGTGGCCAACAAGTTGAATCGTCGTGATTCAGATCCGTATCCTCAATTGCACAATGCTTTGGCTGATATGCATTCTTATTGA 5595 0.4284 MSLPPIECVYVTEDCVREWRSGNPALKVSEPVPMLRFLYELCWTMVRGELPFQKCKVALDSVIFSDKASADKIASNFADIVTQMAQDHTMSGEFRSRLIKLAKWLVESELVPVRLLQERCEEEFLGEAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKASAPTIGIIKSLIGHFDLDPNRVFDIVLECFELQPNNNVFIELIPIFPKSHASQILGFKFQYYQRMEVSNPVPFGLYRLTALLVKQDFIDLDGIYAHLLPKDDEAFEQYNTFSSKRLDEANKIGRINLAATGKDLMDDEKQGDVTIDLFAALDMETDAIEERMSELQNSQTLGLLTGFLSVDDWYHAHILFERLSPLNSVEHVQICDSLFRLIEKSISSAYDVIRRAHLQNPGSSAGASTDAMDIDNSSGHGSFIDLPKELFQMLACTGPYLYRDTMLLQKVCRVLRGYFLSALGLVNRGDGALNPQSHVIGNPHLHLKEARLRVEDALGACLLPSLQLIPANPAVGQEIWELMSLLPYEVRYRLYGEWEKDDERNPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSETLRYQATSFGVTRNNKALIKSTSRLRDALLPKDEPKLAIPLLLLIAQHRSLVVINADAPYIKMVSEQFDRCHGTLLQYVEFLGSAVTPASNYASLIPSLNDLVHLYHLDPEVAFLIYRPVMRLFKSQRSPYVCWPLDDKNAASDASMNFESDPEDHSGSMVLDLGSGQNPLSWSFLLDTVNTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIAKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVRRRLSHEKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPSMSKSSAGNSATVQSGISHNVSQTEPASGKHLDSGNTVKDQTIRTKTTDGKPERTESITATKFDSGHIKLKGSSMANGLDAQTSLPASVGQSGTSKSGENPKQAEESTNRASEEHTIRAAESRTSAKRSLPAGSLSKASKQDPVKEDGRSGKAVTRTSGSSSSDKDLQTHASEGRHTGTTNVSSVSANGNTVSGSAKGSAQSAKIPYDGPGNESKAEVGASKSSDIRASMVKDDGNDITDFTRGSSSRVIHSPRHENTGNSKSSDKIQKRAGSSDELDRLGKRRKGDVELRDLEGEVRYSEREKLMEPRLADDKLGPDELGPYRAGDKPLDRPRDKGNERYEREHRERLDRLDKSRDDFIVEKPRDRSIERYGRERSVERMQERGSERSFNRLPEKAKDERSKDDRNKLRYSDATVEKSHAEDRFHGQSLPPPPPLPPNMVPQSVGAGRRDEDADRRYGATRHSQRLSPRHEEKERRRSEETVVSQDDPKRRKEDDFRDRKREEMKVEEREREREREKANILKEDLDLNAASKRRKLKREHLPTSEPGEYSPVAPPPPPPGIGMSQAYDGRDRGDRKGPMIQHASYIDEPSLRIHGKEVANKLNRRDSDPYPQLHNALADMHSY. 1865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06935 1864 Coils Coil 972 1013 - -
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1498 1665 - -
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1284 1300 - -
Seca12g06935 1864 Pfam Transcription- and export-related complex subunit 592 667 IPR021726 -
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1393 1440 - -
Seca12g06935 1864 Coils Coil 1738 1765 - -
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1688 1785 - -
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1789 1803 - -
Seca12g06935 1864 Pfam Transcription factor/nuclear export subunit protein 2 921 1215 IPR021418 -
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1480 1497 - -
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1346 1362 - -
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1842 1864 - -
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1318 1819 - -
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1242 1283 - -
Seca12g06935 1864 Coils Coil 944 964 - -
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1240 1304 - -
Seca12g06935 1864 Pfam THO complex subunit 2 N-terminus 37 415 IPR032302 -
Seca12g06935 1864 Pfam THO complex subunit 2 N-terminus 442 590 IPR032302 -
Seca12g06935 1864 Coils Coil 1578 1598 - -
Seca12g06935 1864 PANTHER THO2 PROTEIN 7 1775 IPR040007 GO:0000347|GO:0006397|GO:0006406
Seca12g06935 1864 MobiDBLite consensus disorder prediction 1318 1345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06935 Seca-Chr12 161322881 161347655 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06935 12 161322881 161347655 Seca12g06935 12 161322881 161347655 ECH