Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06922 ATGGCTGACGTCGAACACAGACTAAGCCTCGAACCTGAGAAACAGGGCCTTCTGAACCGCCACACCGAGAAGCACTTCACCGCCGGTGAGATCGTCCGCGACATCATCATCGGCGTCTCCGACGGTCTCACCGTCCCCTTCGCCCTCGCCGCCGGCCTATCCGGCGCCAATGCCACATCCTCTATCGTCCTAACCGCCGGCATAGCAGAAGTCGCCGCCGGCGCCATCTCCATGGGTCTCGGCGGGTATTTGGCAGCAAAAAGCGAAGCTGATCATTACAGAAGAGAATTGAAAAGGGAGCAAGAAGAAATAATCTCCGTACCAGATACTGAAGCGGCAGAGGTAGCTGAAATATTGGCTGAATATGGGATAGAAGCACACGAATATGCACCTGTGGTGAATGCTCTCAGAAAGAATCCCCAAGCATGGCTTGATTTCATGATGAAATTTGAGCTGGGACTAGAGAAGCCAGATCCAAGGAGAGCATTGCATAGTGCAATGACAATTGCCATTGCTTACGTATTGGGTGGGCTTGTTCCTCTTGTTCCTTACATGTTCATTCCAAGTGCAACAGAGGCAGTGTTGTTTTCAGTCGTCGTTACCTTGGTTGCATTGCTTATCTTTGGCTTTGCCAAAGGATACTTCACCGGCAATAAACCTGTAAGGAGTGCTTTGGAAACTACTCTAATTGGTGCCATTGCCTCTGCAGCTGCTTTTGGTATGGCAAAGGCTTTCCATCCATAG 744 0.5054 MADVEHRLSLEPEKQGLLNRHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYRRELKREQEEIISVPDTEAAEVAEILAEYGIEAHEYAPVVNALRKNPQAWLDFMMKFELGLEKPDPRRALHSAMTIAIAYVLGGLVPLVPYMFIPSATEAVLFSVVVTLVALLIFGFAKGYFTGNKPVRSALETTLIGAIASAAAFGMAKAFHP. 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06922 247 Coils Coil 83 103 - -
Seca12g06922 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Seca12g06922 247 CDD CCC1 11 245 - -
Seca12g06922 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 17 245 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06922 Seca-Chr12 161161854 161164275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06922 1 243 Nodulin-like Gene Family AT3G43660 25.714 1.96e-09 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06922 12 161161854 161164275 Seca12g06922 12 161161854 161164275 ECH