Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06911 ATGGCGACGATGACGAGTTTGATCGGTCTTATCAATAAGATCCAACGAGCCTGCACCGTCTTGGGCGATCACGGTGGCGAGGGTTTATCCCTCTGGGAGGCTCTTCCCTCCGTCGCCGTCGTCGGAGGACAGAGTTCAGGGAAATCGTCAGTGTTAGAAAGTGTGGTCGGAAGGGATTTTCTGCCTCGTGGATCTGGTATTGTTACACGGAGGCCACTAGTGCTGCAACTTCATAAGACTGAGGAAGGGCAACAGGAATATGCCGAGTTTCTTCACTTACCAAGAAAGAGATTCACCGACTTTGCTGCTGTGAGGAAGGAAATATCAGATGAAACAGATCGTATGACTGGGAAGTCAAAGCAAATTTCTAACGTTCCTATTCACCTCAGCATTTATTCTCCAAATGTTGTAAACTTAACCCTCATAGATCTTCCTGGGTTGACGAAGGTTGCAGTAGAGGGACAACCAGAGACTATTGTCCAAGATATTGAAAACATGGTCCGATCATATGTTGAAAAGCCAAATTGCATTATCTTAGCTATCTCTCCTGCCAATCAAGATATAGCCACCTCAGATGCCATAAAAATTGCAAGAGAAGTTGATCCTTCAGGTGAAAGAACATTTGGAGTGGTTACAAAACTTGATCTCATGGATAAAGGAACTAATGCAGTTGATGTTCTTGAGGGAAGGCAATACAGGCTGCAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCTGATATTAATAAAAATGTTGACATGATTGCTGCTCGTAGGAAGGAGCGGGAATATTTTGAGACAAGTCCTGAATATGGACATTTGGCGCATAAAATGGGCTCAGAATATCTTGCTAAGCTTCTATCTCAGCATTTGGAGCAAGTGATCAGGCAGAAGATACCTAGTATCATTGCCTTAATAAACAAGACCATTGATGAGCTTAATGCAGAGTTGGACCGCATTGGCAGGCCAATCGCTGTGGACTCAGGGGCCCAATTATACACTATTTTAGAGATGTGTCGTGCATTTGACAAAGTATTTAAGGAACACTTGGATGGAGGGTTAGTGCAGTTATTAAGTTTTAGCATTAGTTTGTAG 1098 0.4362 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEEGQQEYAEFLHLPRKRFTDFAAVRKEISDETDRMTGKSKQISNVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPETIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKIAREVDPSGERTFGVVTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIAARRKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEQVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGLVQLLSFSISL. 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06911 365 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Seca12g06911 365 PANTHER DYNAMIN 6 354 IPR022812 -
Seca12g06911 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Seca12g06911 365 PRINTS Dynamin signature 60 77 IPR022812 -
Seca12g06911 365 PRINTS Dynamin signature 183 201 IPR022812 -
Seca12g06911 365 PRINTS Dynamin signature 35 53 IPR022812 -
Seca12g06911 365 PRINTS Dynamin signature 133 150 IPR022812 -
Seca12g06911 365 PRINTS Dynamin signature 225 244 IPR022812 -
Seca12g06911 365 PRINTS Dynamin signature 202 218 IPR022812 -
Seca12g06911 365 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Seca12g06911 365 Gene3D - 3 352 IPR027417 -
Seca12g06911 365 FunFam dynamin-related protein 1E 4 310 - -
Seca12g06911 365 Pfam Dynamin family 38 213 IPR045063 -
Seca12g06911 365 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Seca12g06911 365 Pfam Dynamin central region 222 354 IPR000375 -
Seca12g06911 365 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06911 Seca-Chr12 161068938 161076159 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06911 12 161068938 161076159 Seca12g06911 12 161068938 161076159 ECH