Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06909 ATGGCGGAGGTTTCCGGCGACGTGGGAGCGGAGGCGACGGTGGCGACGCCGGCGCCGTTGACGGTTTCGGGATCCTTCAAGGAAGGGAAAGGCTCATCACGGAGGCGAACGCATTCGATGAGGCCGAGTCTGGACGCGGACGAGTTCATGAACCTGCTGCACGGCTCGGATCCGGTGAAGTTGGAGCTCAATCGGCTGGAGAATGAAGTTAGAGATAAGGACAGAGAGTTATCAGAAGCTCAGGCGGAGATCAAAGCCTTGAGGCACTCTGAACGACTCAGAGAAAAGGCCGTAGAAGAGCTCACTGAAGAATTGTCGAAGGTTGAGGGGAAGCTGAAGTTAACAGAATCTCTTCTAGAAAGCAAAAATCTTGAAATAAAGAAAATCAATGATGAAAAGAAAGCATCAATGGCAGCTCAGTTTGCAGCTGAAGCCACTCTTCGAAGGGTTCACGCTGCTCAGAAGGATGATGACATGCCTCCGATTGAAGCTATTCTTGCTCCTCTAGAGGCTGAACTCAAGCTTGCTCGTCAAGAGATTGCTAAACTTCAAGATGATAACAAAGCTTTAGATCGTCTTACCAAATCTAAAGAAGCAGCACTACTTGAAGCTGAGAGGACTGTTCAGGTTGCCTTGGCTAAGGCCTCCATGGTGGATGATCTCCAAAATAAAAATCAAGAGCTCATTAAACAAATTGAGATTTGCCAGGAAGAAAATAAAATTTTGGACAAAATGCATAGACTGAAGGTGGCAGAGGTTGAAAAGCTTACCCAAACTGTGAGAGAACTAGAAGAGGCTGTCCTTGCAGGTGGTGCAGCTGCAAATGCTGTGAGAGATTATCAGCGGAAAGTTCAAGAAATGAATGAAGAAAGAAAAACTCTTGATCGGGAGTTGGCTCGTGCCAAGGTAACAGCCAACAGAGTAGCTGTTGTAGTGGCAAATGAATGGAAAGATTCTAATGACAAAGTGATGCCTGTCAAACAATGGCTTGAAGAACGACGATTCTTGCAGATCAAAACTACATTCTTACAGGGAGAGATGCAGCAACTTCGGGAAAAGCTTGCTATAACTGAACGCACTGCCAAGTCTGAAGCACAGTTAAAAGAAAAATATCAATTACGGCTTAAAGTGCTACAAGAGAGTTTGAGAGAAACTTCTAACAGTATTAATCGCGGCACCTCAGAGGGAAGATGTGTTAGCAATGGGCCTTCCCGACGTCAATCCCTAGGTGGAGCTGATAACATCTCCAAACTAACCTCTAATGGGTTTCTATCTAAGAGAACACCATCATCTCAACTGAGGTCCTCTGTGTCCTCCAGCACAGTTTTGAAGCATGCTAAAGGCACATCTAAATCTTTTGATGGTGGCTCAAGGTCACTGGAAAGGAGTAAAATTCTTCTAAATGGAAAGCCTCCAAGTTCCTCATTTAACCAGTCTTCTGAAGGAACCAAAAGCAGAGAGGAAAATGATAATTGGAAAGGAAATTCTGATGATAAGCCAAATGACTTCCCAGCAGTGGACACAGAAGATAGTGTTCCAGGAGTTCTGTATGATTTGCTGCAGAAAGAGGTCTTAGCCTTGAGGAAAGCTGGTCATGAAAAAGATCAAAGCCTAAAAGATAAAGATGATGCCATTGAGATGTTAGCAAAGAAAGTGGAAACATTGACCAAAGCCATGGAAGTTGAGGCAAAGAAGATGAGAAGGGAAGTAGCTGCCATGGAGAAGGAGGTAGCTGCAATGCGTATAGAGAAAGAACAAGAAAGCAGGGCAAAGCGATTCAGCAGTGTAAAAGGCCCTATTAACAGTGCTCAGCATCAGCTTGTTTCTGGGAGAAATGTGGCACGGGGAGGATTAACACGCAGCACCCAATGA 1872 0.4509 MAEVSGDVGAEATVATPAPLTVSGSFKEGKGSSRRRTHSMRPSLDADEFMNLLHGSDPVKLELNRLENEVRDKDRELSEAQAEIKALRHSERLREKAVEELTEELSKVEGKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNKALDRLTKSKEAALLEAERTVQVALAKASMVDDLQNKNQELIKQIEICQEENKILDKMHRLKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVAVVVANEWKDSNDKVMPVKQWLEERRFLQIKTTFLQGEMQQLREKLAITERTAKSEAQLKEKYQLRLKVLQESLRETSNSINRGTSEGRCVSNGPSRRQSLGGADNISKLTSNGFLSKRTPSSQLRSSVSSSTVLKHAKGTSKSFDGGSRSLERSKILLNGKPPSSSFNQSSEGTKSREENDNWKGNSDDKPNDFPAVDTEDSVPGVLYDLLQKEVLALRKAGHEKDQSLKDKDDAIEMLAKKVETLTKAMEVEAKKMRREVAAMEKEVAAMRIEKEQESRAKRFSSVKGPINSAQHQLVSGRNVARGGLTRSTQ. 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06909 623 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 42 601 IPR009768 GO:0007010|GO:0008017
Seca12g06909 623 MobiDBLite consensus disorder prediction 586 623 - -
Seca12g06909 623 MobiDBLite consensus disorder prediction 386 456 - -
Seca12g06909 623 Coils Coil 277 304 - -
Seca12g06909 623 MobiDBLite consensus disorder prediction 29 43 - -
Seca12g06909 623 MobiDBLite consensus disorder prediction 595 623 - -
Seca12g06909 623 Coils Coil 166 193 - -
Seca12g06909 623 Coils Coil 63 90 - -
Seca12g06909 623 MobiDBLite consensus disorder prediction 1 44 - -
Seca12g06909 623 MobiDBLite consensus disorder prediction 468 482 - -
Seca12g06909 623 MobiDBLite consensus disorder prediction 483 505 - -
Seca12g06909 623 Coils Coil 347 388 - -
Seca12g06909 623 Coils Coil 98 132 - -
Seca12g06909 623 MobiDBLite consensus disorder prediction 386 509 - -
Seca12g06909 623 Pfam Microtubule-associated protein 70 47 604 IPR009768 GO:0007010|GO:0008017
Seca12g06909 623 Coils Coil 218 266 - -
Seca12g06909 623 Coils Coil 549 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06909 Seca-Chr12 161053679 161059718 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06909 12 161053679 161059718 Seca12g06909 12 161053679 161059718 ECH