Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06882 ATGGGTTCCGAAGGATCTAGTGTCGTCGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGCGAGGTGAAAAGGGAATTGGAGATGGAACTGTTAGCTATGGAATGGATGATGCTGATGATATATACATGCAGTCATGGACTGGGACCATCATTGGCCCCCCTGGTACATGCATGGGTTTACAACAATGCACATCATCCTTGTCAATGTACACTGGCAAACTTTGGTGTTTGCATGTCTCATTTATCTTGAAACAGACTGTTCATGAAGGCCGTATCTACCAGTTGAAATTGTTTTGTGGCAAGGATTATCCAGACAATCCACCATCTGTTAGATTTCAGACAAGGATTAACATGACTTGCATCAACCAAGAAACTGGAGTGGTGGAGCCACATTTATTTCCCATGCTTGCTAATTGGCAAAGAGAGTGTACAATGGAAGACATTTTGTTGCAATTGAAGAAAGAAATGACGTCTCCGCAAAACCGGAGGTTAGCTCAGCCTCCTGAAGTTAATAATCAATGA 525 0.4229 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTCMGLQQCTSSLSMYTGKLWCLHVSFILKQTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCINQETGVVEPHLFPMLANWQRECTMEDILLQLKKEMTSPQNRRLAQPPEVNNQ. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06882 174 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 44 163 - -
Seca12g06882 174 Pfam Ubiquitin-conjugating enzyme 83 164 IPR000608 -
Seca12g06882 174 SUPERFAMILY UBC-like 11 170 IPR016135 -
Seca12g06882 174 Gene3D Ubiquitin Conjugating Enzyme 2 174 IPR016135 -
Seca12g06882 174 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 174 IPR000608 -
Seca12g06882 174 SMART ubc_7 14 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06882 Seca-Chr12 160830314 160834808 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06882 12 160830314 160834808 Seca12g06882 12 160830314 160834808 ECH