Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05449 ATGGATCAATCTCAGAATCAGAGATCAGCAGCAACAGCAACACCCTCGCGTTCTTACCAATTCCACCCTGCTCGAGCACCCATTCTCGATCTCTTCAACCTCTACTTAGGACTTGGAAGAAACAGCCGCCATAAACCTGAAGACTCACTCCGCGAACCACCGAACAAAACACAAAAGCGCGTGCACGCTCTTAATCGAGAGCTTCCTCCGCCGAATGAGCAGTTCATTCTAGATTTTGAGCAGCTTCAGAGCCAGTTTCCTGACCAGGATCAATTGCGTTCTGTGACAGAGGCTATTCTTATATCGCTCGTTGTGCAGTGTAGTGGTCATGGACCGCGATCAGACTTTCTTCTTTTTGTTTTACGGAGTTTGTGTGGTATTGGGTGCATTAACTGGGACAGCTTTCTGCCATCCCTTCTTTCTTCAGTTTCTTCAGCAGAATTGCCAGTGGGTCAGCTGAGTCAAGCAGTGCCAACAGTTTCCTCATCAAGCTTATCGCAGTCAGGAATGCTGCCACCTCAAAACACAATTGCTAATTCATCTAACTTTCAGTCTTCAAATCCTGCATCTCCATTGCCTTCAGTTCATACTATTGGCTCCCCTGCACAGTCAACTATTGAACCATTATCTTGCGCAGCTTTATCTCCTGTCAAATCATCTGATATTTCCTCCACTGGACAACAATCTAAACTACGAGGCAATTCATCCATTAGAAATAATGATATTAGCAATAGCAGCCTTCGCCAGCTATGTTGCAAGATAATTTTAACCGGTCTTGAGAGCAGTTTAAAACCTGTGACATATGCTGAAATCTTCCACCAAATGCTGAATTGGCTGGTGAATTGGGACCAGAGGCAGCAGGGAGTTGACGAATCTGATATTCTGAAATCATGGAGACCTGACAAAGCTGTAATTGCATGGCTACACAGTTGCTTGGATGTGATCTGGCTTTTAGTTGACGAGGGGAAATGCCGGGTCCCCTTTTATGAATTATTACGTAGTGATTTGCAATTCATAGAGAATATTCCTGATGATGAAGCATTATTTACACTCATCTTGGAGATCCACAGGAGACGAGATATGATGGCTATGCACATGCAAATGTTAGACCAGCATGTTCATTGCCCTACATTTGGGACTCATCGGATCCTGAATCAGACTACACCTGCTATTTCAGGTGAAGCAGTAGCACACCTGCGACTATCACCGATCTCATATTTAAGTGTACTTGGAGAACCATTGCATGGAGAGGATATTACAAACTCTATTCAGAAGGGAAGTTTGGATTGGGAAAGAGCTGTACGTTGCATAAGGCATGCCCTCCGTACTACACCATCACCTGATTGGTGGAGACGTGTGCTGGTACTGGCTCCTTGCTATAGGCCTTCATCTCAAGGGCCTACTGCTGGTGCTGTTTTTTCTTCAGAGATGATCTGTGAGGCAACTATTGATAGAATTGTGGAACTGTTGAAAATGACAAATTCAGGCAATAATCTATCTTTCTCTACCTGTGTGTGTGTTGTTGTATCAGTGTTCTCATTAGCCTTTGGTGGATAA 1557 0.4425 MDQSQNQRSAATATPSRSYQFHPARAPILDLFNLYLGLGRNSRHKPEDSLREPPNKTQKRVHALNRELPPPNEQFILDFEQLQSQFPDQDQLRSVTEAILISLVVQCSGHGPRSDFLLFVLRSLCGIGCINWDSFLPSLLSSVSSAELPVGQLSQAVPTVSSSSLSQSGMLPPQNTIANSSNFQSSNPASPLPSVHTIGSPAQSTIEPLSCAALSPVKSSDISSTGQQSKLRGNSSIRNNDISNSSLRQLCCKIILTGLESSLKPVTYAEIFHQMLNWLVNWDQRQQGVDESDILKSWRPDKAVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHVHCPTFGTHRILNQTTPAISGEAVAHLRLSPISYLSVLGEPLHGEDITNSIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPCYRPSSQGPTAGAVFSSEMICEATIDRIVELLKMTNSGNNLSFSTCVCVVVSVFSLAFGG. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05449 518 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 47 498 IPR021629 -
Seca10g05449 518 MobiDBLite consensus disorder prediction 176 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05449 Seca-Chr10 123622177 123627637 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05449 10 123622177 123627637 Seca10g05449 10 123622177 123627637 ECH