Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05422 ATGAATGTATTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTGTTGGACAGTGTTCCAGATATTGATATGCTGGGTTTTCTTCCCGATTTTCTTGATGGTTTGTTTAATATGTTGAGCGATTCAAGCCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAGAATTCCCCATCTGTAGATTATGGTCGAATGGCTGAAATATTGGTACAGAGGGCTGGTTCTCCAGATGAATTTACTAGGTTAACAGCTATAACATGGATAAATGAGTTTGTCAAACTTGGTGGTGACCAGCTGGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGCATATCTGATAAAGAAGAGAAAATCAGAGTGGTTGCTCGGGAAACCAATGAAGAGCTGCGAGCAATCAAGGCTGATCCAGCTGAAGCGTTTGATGTAGGAGCAATCCTCTCAATTTCTAGGAGGCAACTATCTAGTGAATGGGAGGCAACTCGAATTGAAGCTTTGAACTGGATATCAACCCTTTTAAACAGACATCGTACTGAGGTTTTGACATACCTGGAGGACATATTTGACACCCTTCTCAAAGCACTTTCAGATCCATCCGATGAGGTTGTGCTTTTAGTTCTTGAAGTCCATGCATGCATTGCAAGAGATCCTCAGCACTTCCGGCAGCTTGTTGTTTTCCTAGTGCACAATTTTCGGGTAGATAATTCTCTTTTGGAGAAGCGTGGTGCTTTGATAATCCGTCGCCTTTGTGTGCTTTTGAATGCTGAGAGAGTCTACCGGGAACTTTCTACAATATTAGAAGGAGAATCCGATTTGGATTTTGCATCAGTTATGGTTCAGGCTTTGAATTTGATCTTACTTACGTCATCGGAATTATCTGAGATTAGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCTGGAAAGGACTTGTATGTTTCCTTGTATGCCTCTTGGTGTCATTCTCCAATGGCAATTATAAGTCTTTGCTTTTTAGCTCAGACTTACCAACATGCAAGTGCTGTGATTCAATCTCTGGTAGAGGAGGATATAAATGTCAAGTTTTTGATCCATCTGGATAAATTGATTCGCTTGCTGGAAACTCCAATCTTTGCTTATCTTAGATTGCAGCTTCTTGAACCTGGAAGATATATATGGTTATTCAAAGCATTGTATGGTCTTCTGATGTTGCTCCCTCAGCAAAGTGCCGCCTTTAAGATTCTGAAAACTCGTTTAAAAGCTGTGCCATCGTATTCTTTCAATGGTGAGCAATTGAAGAAAATGCCTTCAGGGGATTCCTACCAATTTCTTCATCACATGCCTGATGGATATCAAACCACTGAGGATGGTGACGTAACTGAAGATCGTGGGAGCTCACATAGTGGAATAAATTTTGCTGCTAGGTTACAACAGTTTCAGCAAATGCAGCATCAGCATATGGTGCACACTAAAGCACAGACAAAGTCACAGAATATTTCCACTTCATTACCAAAGGAGGCACAAAAAGAGGAAGAACCAAGGAGACCTCAGTCTGTTGACCTTAATGTTCCTCCTTCAAGATCAAAGAGAGGTCCAGGGCAGCTACAATTATAA 1629 0.4088 MNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAIKADPAEAFDVGAILSISRRQLSSEWEATRIEALNWISTLLNRHRTEVLTYLEDIFDTLLKALSDPSDEVVLLVLEVHACIARDPQHFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASVMVQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYQHASAVIQSLVEEDINVKFLIHLDKLIRLLETPIFAYLRLQLLEPGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKMPSGDSYQFLHHMPDGYQTTEDGDVTEDRGSSHSGINFAARLQQFQQMQHQHMVHTKAQTKSQNISTSLPKEAQKEEEPRRPQSVDLNVPPSRSKRGPGQLQL. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05422 542 MobiDBLite consensus disorder prediction 448 472 - -
Seca10g05422 542 MobiDBLite consensus disorder prediction 526 542 - -
Seca10g05422 542 MobiDBLite consensus disorder prediction 488 509 - -
Seca10g05422 542 Gene3D - 1 65 IPR011989 -
Seca10g05422 542 Gene3D - 66 236 IPR011989 -
Seca10g05422 542 MobiDBLite consensus disorder prediction 488 542 - -
Seca10g05422 542 PANTHER TAX1 BINDING PROTEIN-RELATED 1 504 IPR026825 GO:0006661|GO:0070772
Seca10g05422 542 Pfam Vacuolar protein 14 C-terminal Fig4p binding 248 427 IPR021841 -
Seca10g05422 542 FunFam protein VAC14 homolog isoform X1 67 229 - -
Seca10g05422 542 SUPERFAMILY ARM repeat 5 375 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05422 Seca-Chr10 123180289 123189047 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05422 10 123180289 123189047 Seca10g05422 10 123180289 123189047 ECH