Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05408 ATGGCCATCGAAACTCTAGTTTTGGGCGCTGGTCAAGAGGTTGGGAAGAGCTGCGTGGTGGTGAACATCAATGGGAAGCGAATCATGTTCGATTGCGGAATGCACATGGGCTACGTGGACCACCGTCGATTCCCCGATTTCTCTCTTATCTCCCCTGATGGCGATTTCAACTCTGCCCTCACTTGCATCATCATCACTCATTTTCACTTGGATCATGTTGGGGCGTTGGTTTACTTCACCGAAGTTTGCGGGTATCATGGACCGATTTACATGACGTACCCAACAAAAGCTTTGGCTCCTTTGATGCTAGAAGATTATCGGAAAGTGATGGTTGATCGTCGGGGTGAGGAAGAACAATTCACTTCTGATGATATTGCTAAGTGCATGAAGAAAGTTATTGCTGTAGATCTGAAGCAGACTGTACAAGTAGATGAAAACCTACAGATACGTGCATATTATGCAGGACATGTTATTGGAGCTGCAATGTTCCATGCAAAAGTGGGAGACACAGCAATGGTTTATACAGGAGACTACAATATGACACCAGATAGACACCTTGGAGCAGCTCAAATTGATCGGCTACGGCTTGACCTTCTTATAACTGAATCCACATATGCAACTACAATACGAGATTCAAAATATGCTCGTGAGAGGGAATTCCTCAAAGCTGTTCATAAATGTGTTTCTGGAGGAGGAAAGGTGCTTATTCCAACATTTGCTCTTGGAAGAGCTCAGGAACTATGCATTTTGTTGGATGATTACTGGGAGCGCACGAGTTTGAAGGTTCCTATCTACTTCTCAGCAGGTTTAACTATTCAAGCTAATATGTATTATAAGATGCTTATTAGTTGGACAAACCAGAAGATTAAAGATTCATACTCTACACATAATGCATTTGATTTTAAGAATGTTCACAATTTTGAAAGGTCTATGCTAGATGCTCCTGGTCCTTGTGTTCTCTTTGCCACTCCTGGGATGATAAGTGGTGGATTTTCACTTGAAGTTTTTAGGCACTGGGCACCATCAGAAAATAACCTTGTCACGTTGCCTGGGTATTGTGTGGCTGGAACAATAGGACATAAATTAATGTCAGGTAAGCCCACCAAAATTGATCTGGATCATGATACACAAATAGATGTTCGTTGCCAGGTACATTTTAACCCCTTCCCATTTATTTACTAG 1182 0.4222 MAIETLVLGAGQEVGKSCVVVNINGKRIMFDCGMHMGYVDHRRFPDFSLISPDGDFNSALTCIIITHFHLDHVGALVYFTEVCGYHGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEEQFTSDDIAKCMKKVIAVDLKQTVQVDENLQIRAYYAGHVIGAAMFHAKVGDTAMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFALGRAQELCILLDDYWERTSLKVPIYFSAGLTIQANMYYKMLISWTNQKIKDSYSTHNAFDFKNVHNFERSMLDAPGPCVLFATPGMISGGFSLEVFRHWAPSENNLVTLPGYCVAGTIGHKLMSGKPTKIDLDHDTQIDVRCQVHFNPFPFIY. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05408 393 Pfam Metallo-beta-lactamase superfamily domain 21 191 IPR001279 -
Seca10g05408 393 SMART Lactamase_B_5a 15 232 IPR001279 -
Seca10g05408 393 FunFam Integrator complex subunit 11 isoform X3 8 234 - -
Seca10g05408 393 Pfam Beta-Casp domain 244 362 IPR022712 -
Seca10g05408 393 Gene3D - 212 385 - -
Seca10g05408 393 SMART Beta_Casp_2 244 362 IPR022712 -
Seca10g05408 393 Gene3D - 8 211 IPR036866 -
Seca10g05408 393 CDD INTS11-like_MBL-fold 6 203 IPR041897 -
Seca10g05408 393 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER 5 386 - -
Seca10g05408 393 SUPERFAMILY Metallo-hydrolase/oxidoreductase 3 389 IPR036866 -
Seca10g05408 393 FunFam Cleavage and polyadenylation specificity factor subunit 3-II 212 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05408 Seca-Chr10 122954910 122966014 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05408 10 122954910 122966014 Seca10g05408 10 122954910 122966014 ECH