Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05390 ATGGGTGATGGAATAGTTGAGAGAGCCCTAAACAGCTTGGGGAAAGGCTTTGACTTAACCTCAGATTTTAGCCTCAAATTCTGTAAAGGTGAAAAGCGTTTGGTTGTTCTCAATGAAACAGAGAAAAGAGAGCTCACAGTGCCTGGTTTTGGACCCATCAAAGATGTCTCCATTGACATCAAATGTGACAAAGGAGATCGCACTCGCTACTCCTCTGATATCCTCACCTTCACCCAAATGTCAGAGTTGTTCAATCAGAAGAGCTCAATCCCTGGGAAAATCCCATCTGGGTATTTCAATGCCGTGTTTGGGTTTGATGGAGGTTCATGGGCAACTGATGCAGCTAAAACAAAGTACTTAGCTCTTGACGGATATTTTATTATATTGTTCAATGTTCATATTGATCGGTACCCTCTTGTTGTGTCCAAACAAGTCCTTGAAGCTGTTCCTTCTTCTTGGGATCCTCCTGCACTAGCAAGATTCATTAAAAAATTTGGGACGCACATCCTTGTGGGGCTTAGCATTGGTGGTAAAGATTTGATATTTGTGAAGCAAGATGTTTCTTCCAAATTGGCACCATCAGAGCTCAAGAAGCATTTGCATGAACTTGGAGATCAGCTTTTCACTGGGACATGCAATTTCCTTCCCAAAACCAAAGAGCATAAATACAAGGTACCACAAGCTTTTGATGTGTTTGGTCCACAAAGTATTGCCTTCAATAGCTTCTCAACCGTTTGTGAAAAAGATGGAATAACGTTGATATGCTCAAAGAGGGGAGGAAATAGGCAAGTGAGCAACCATTGTGAATGGCTTCTGACGGTTCCTGAAAAGCCAGATGCTGTTCATTTTAGCTTCATTCCCATCACTTCTCTTCTTGATGCTATTCCTGGCAATGGCTTCCTCTCCCATGCTATCAACCTCTATCTTCGATATAAGCCTCCAATCTCAGATTTGGCCTATTTTCTTGACTTTCAATTAACACAAAAGCTTTGGGCTCCGATTCACAATGATCTCTCACTAAGTCCAGTAACAAATAGAGATACTCTTTCACCTTTTCTCACCTTCAACTTGATAGGTCCTAAGCTTTATGTAAACACAACCAAGGTAACAGTTGGTAAAAGACCAATCACAGGGATGCGTTTATTAGCTATACACTTGCAACATCTCTTAAACACTCCAATGATGCTTGAGAGCAAAATTGAGGAGAGAATATGGACACAAGAAATTAGTCATGATAATCGATTCTTTGAAGCACTAAACGGGAAGAAATTTTCCCATGTATGCACAGCACCAGTGAAGTACAATCCAACATGGTGCTCTGATAAAGATGTGGCTTTCATTGTCACAGGAGCTCAACTTCATGTGAACAAACATGATTCAAAGAGTGTCCTACATCTAAGGTTATTGTTCTCTAAGGTATCTAATTCTTCTATCATAAAATCCAATTGGGCACAGAGCAACTCTGTTTTTTCTCCTCAGAGTTCAAGCATTTTCTCTGCTATAAGCACATCCATTTCAGGGAAAGATCAGAAACAACAAGAAGAACTAGTTTTGGATTCAAGTGTGTTTCCAACAGGACCTCCAGTGCCTGTACAAACACAAAAGCTATTGAAATTTGTAAACATGTCACAGTTATGTAAAGGTCCACAAGACAGTCCTGGCCATTGGATTGTCACTGGGGCAAGATTGGTCTTGGAGAAGGGTAAAATAAGTTTATGGGTTAAGTTCTCTTTGTTGAATGTTCAGGAAAATGAAATAGCAACATAA 1767 0.4024 MGDGIVERALNSLGKGFDLTSDFSLKFCKGEKRLVVLNETEKRELTVPGFGPIKDVSIDIKCDKGDRTRYSSDILTFTQMSELFNQKSSIPGKIPSGYFNAVFGFDGGSWATDAAKTKYLALDGYFIILFNVHIDRYPLVVSKQVLEAVPSSWDPPALARFIKKFGTHILVGLSIGGKDLIFVKQDVSSKLAPSELKKHLHELGDQLFTGTCNFLPKTKEHKYKVPQAFDVFGPQSIAFNSFSTVCEKDGITLICSKRGGNRQVSNHCEWLLTVPEKPDAVHFSFIPITSLLDAIPGNGFLSHAINLYLRYKPPISDLAYFLDFQLTQKLWAPIHNDLSLSPVTNRDTLSPFLTFNLIGPKLYVNTTKVTVGKRPITGMRLLAIHLQHLLNTPMMLESKIEERIWTQEISHDNRFFEALNGKKFSHVCTAPVKYNPTWCSDKDVAFIVTGAQLHVNKHDSKSVLHLRLLFSKVSNSSIIKSNWAQSNSVFSPQSSSIFSAISTSISGKDQKQQEELVLDSSVFPTGPPVPVQTQKLLKFVNMSQLCKGPQDSPGHWIVTGARLVLEKGKISLWVKFSLLNVQENEIAT. 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05390 588 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 322 IPR020864 -
Seca10g05390 588 Pfam MAC/Perforin domain 99 308 IPR020864 -
Seca10g05390 588 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 5 581 IPR044663 GO:0006952|GO:0012501|GO:2000031
Seca10g05390 588 SMART MACPF_8 117 310 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05390 Seca-Chr10 122554087 122561361 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05390 10 122554087 122561361 Seca10g05390 10 122554087 122561361 ECH