Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05385 ATGTCGAGCCCAGTGGACCATACCGATCGCAATCAAAGAGCTGAAGCGATTCCCCACTCTACAGCACCACCAAATTGGTCTGCTCATGTTTCAGAGATAAGAACTGTTAAGGTTAGCAACATATCACTCATTACTTTGCAGAAGGACATCGAAGAGTTCTTTTCATTCTCAGGTGATATTCGATACATTGAGATGCAAAGGGAAACTGATCGTACCCAGGTTGCTTATGTTACTTTTAAGGATTCACAGGGAGCAGAGACAGCAGTTCTCTTGACAGGTTCCAAGATAGCTGATCTATATGTCACCATTACACCAGTGGAGAAGTACCAGCTTCCTCCTGAAGCTCTTCTCTCTAGTCCAACAAACCAAAGTGCCACTGCAGTTAAGGCTGAAGATGTAATAAGCACAATGCTTGCCAAGGGTTTCATTTTAGGAAAGGACGCAATCAACATAGCAAAATCCTTTGATGAACGCCATCATTTGACCTCAAATGCTTCTTCCACAGTTGCTTCCATTGATCGTAAAATGGGTTTAAGTGATAAACTAAGTATCGGAACAGCCATTGTCAATGAAAAGGTGAGAGAGATGGATGAAAGGTTTCAGCTCTCTGAAATGACGAAGTCTGCTATTGCTGTTGCTGAGCAAAGGGCAAGTAGTGCTGGATCAGCTATCATGAGCAATCCTTATGTATTAACTGGAGCTTCATGGGTGTCAAGTGCCTTTACTGCTATTGCAAAGGCAGCAGGTGATGTCAGCACGATGACTAAGGAGAAGGTTGAACAAGCTGAGGTGGAAAAGAAGGATATAATTTACAATGAAAGGAAAGGGACTGTTGATGAATTTGCACAGATGCACTTTGAGGAGTCTTCAAATGGGGGCCCTGCAGTAGTTCCTGTTAATTCAGACAATGATAGTAAGCTGGGAATTATAACTTGA 936 0.4263 MSSPVDHTDRNQRAEAIPHSTAPPNWSAHVSEIRTVKVSNISLITLQKDIEEFFSFSGDIRYIEMQRETDRTQVAYVTFKDSQGAETAVLLTGSKIADLYVTITPVEKYQLPPEALLSSPTNQSATAVKAEDVISTMLAKGFILGKDAINIAKSFDERHHLTSNASSTVASIDRKMGLSDKLSIGTAIVNEKVREMDERFQLSEMTKSAIAVAEQRASSAGSAIMSNPYVLTGASWVSSAFTAIAKAAGDVSTMTKEKVEQAEVEKKDIIYNERKGTVDEFAQMHFEESSNGGPAVVPVNSDNDSKLGIIT. 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05385 311 SUPERFAMILY RNA-binding domain, RBD 22 110 IPR035979 GO:0003676
Seca10g05385 311 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 33 263 - -
Seca10g05385 311 SMART rrm1_1 35 104 IPR000504 GO:0003723
Seca10g05385 311 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 97 IPR000504 GO:0003723
Seca10g05385 311 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 108 IPR000504 GO:0003723
Seca10g05385 311 Gene3D - 29 104 IPR012677 -
Seca10g05385 311 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca10g05385 Seca-Chr10 122388387 122392128 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05385 10 122388387 122392128 Seca10g05385 10 122388387 122392128 ECH