Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05354 ATGTCAACTTTGACGGTACCTCCTGTGCTACCAACGCCTCGTGAAGATGCTGTGAAGCTGCATAAAGCCTTCAAAGGACTTGGCTGCAATACTTCTAAAGTTATCCAAATCCTTGCTCACAGGAATGCAGAACAACGTAGCTTCATTCAACAAGAGTATGAAACTACCTTTTCTGAACTACTTTCCAAACGGATATCTTCAGAGCTTCATGGCCATACCAAGAAAGCTCTGTTACTTTGGCTACATGATCCTGCAACCCGGGATGCTGTTGTAGCTAAGCGTGCCTTAAAGTTAAAGGCACCAGTTGTTGATAACCAAGGAATAACAGAAATAATATGTTCTCGTACCCCTTCACAACTAAGGCGATTGAAAGAAGTTTATCTGTCAACATACCATTCCTCTCTTGAGCATGACATTGAAAGCCAAACCAGTGGTGATCACAAGAAGTTGTTGCTGGCATATTTAAGTGTACCACGTTATGAAGGCCCAGAATTAGATGATGCAATAGTACAACAGGACGCCCAACAACTATATAAAGCAGGAGAGAAGAGGATAGGAACTGATGAAAAGGTGTTCATAAAGATTTTTAGTGAAAGAAGCTGTGCACATTTGGCTGCAGTTAGCTCTGCTTATAGAGCTGCATTTGGAAACACACTAGAAAAGGTATGCCTTCATAACGCAATAAAGAAGGAAACATCTGGCAGTTTTTTGAGTGGCCTCTTGACCATACTGAGATGTGCTATTAACCCTGCTATGTACTTTGCCAAGATTCTGCGCAAGGCAATGAAGGGTATAGGAACTGATGATAGTAGACTAATAAGGATAATTGTGACAAGGACTGAGATGGACATGCAACATATAAAAGCAGCATATTATAGTAAATATGGAAAGCCATTAACCCATGCTGTTCGTTCAGACACATCAGGCCATTATAAAGACTTTCTTTTACATCTTTTAGGTACTGATTATTAG 972 0.4043 MSTLTVPPVLPTPREDAVKLHKAFKGLGCNTSKVIQILAHRNAEQRSFIQQEYETTFSELLSKRISSELHGHTKKALLLWLHDPATRDAVVAKRALKLKAPVVDNQGITEIICSRTPSQLRRLKEVYLSTYHSSLEHDIESQTSGDHKKLLLAYLSVPRYEGPELDDAIVQQDAQQLYKAGEKRIGTDEKVFIKIFSERSCAHLAAVSSAYRAAFGNTLEKVCLHNAIKKETSGSFLSGLLTILRCAINPAMYFAKILRKAMKGIGTDDSRLIRIIVTRTEMDMQHIKAAYYSKYGKPLTHAVRSDTSGHYKDFLLHLLGTDY. 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05354 323 ProSiteProfiles Annexin repeat profile. 249 320 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 FunFam Annexin 1 82 - -
Seca10g05354 323 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 ProSitePatterns Annexin repeat signature. 266 318 IPR018252 GO:0005509|GO:0005544
Seca10g05354 323 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Seca10g05354 323 FunFam Annexin 159 249 - -
Seca10g05354 323 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Seca10g05354 323 PRINTS Annexin family signature 177 203 IPR001464 GO:0005509|GO:0005544
Seca10g05354 323 PRINTS Annexin family signature 262 282 IPR001464 GO:0005509|GO:0005544
Seca10g05354 323 PRINTS Annexin family signature 306 319 IPR001464 GO:0005509|GO:0005544
Seca10g05354 323 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Seca10g05354 323 SUPERFAMILY Annexin 2 322 IPR037104 GO:0005509|GO:0005544
Seca10g05354 323 Gene3D Annexin 159 249 IPR037104 GO:0005509|GO:0005544
Seca10g05354 323 Gene3D Annexin 250 322 IPR037104 GO:0005509|GO:0005544
Seca10g05354 323 SMART annex3 103 154 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 SMART annex3 266 318 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 SMART annex3 186 243 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 Pfam Annexin 103 153 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 Pfam Annexin 16 79 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 Pfam Annexin 172 243 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 Pfam Annexin 253 318 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 ProSiteProfiles Annexin repeat profile. 168 245 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 Gene3D Annexin 83 155 IPR037104 GO:0005509|GO:0005544
Seca10g05354 323 ProSiteProfiles Annexin repeat profile. 83 156 IPR018502 GO:0005509|GO:0005544
Seca10g05354 323 PANTHER ANNEXIN 13 318 - -
Seca10g05354 323 FunFam Annexin 250 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05354 Seca-Chr10 121956324 121961209 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05354 10 121956324 121961209 Seca10g05354 10 121956324 121961209 ECH