Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01073 ATGGCTACTACTCGCAACGTTGAGAAGATGGCTTCAATTGATGCTCAATTGAGGTTACTGGCACCAAGGAAGGTGTCTGATGATGATAAACTGGTGGAGTATGATGCTTTATTGCTGGACCGTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGACATCAGACAAACGGTTCAAGATTGTTACGAGCTGTCAGCTGAGTATGAAGGGGAACATCAGCCTGAGAAGTTGGAGGAACTTGGGAATATGCTAACTGGTCTTGATGCTGGGGATTCTATTGTTATTTCCAAATCATTTTCTCACATGCTTAATTTGGCCAATTTGGCAGAAGAAGTTCAAATTGCCTACCGAAGAAGGATAAAGTTACTAAAGAAGGGTGATTTTGCTGATGAGAACTCTGCCATAACTGAATCTGACATTGAAGAGACCTTCAAGAAGCTTGTGAGTGAACTGAAGAAGACCCCTGAGGAAGTCTTTGATGCTTTGAAGAACCAGACTGTAGATTTGGTCCTAACTGCTCATCCTACTCAGTCTGTTCGCAGATCTTTGCTGCAAAAGCATGGAAGGGTAAGGAATTGTTTGACACAGCTGTATGCTAAAGACATTACACCAGATGATAAACAGGAACTTGATGAGGCTTTACAAAGAGAGATTCAAGCTGCATTTCGCACTGATGAAATTCGAAGGAATCCTCCTACACCACAAGATGAGATGAGGGCAGGAATGAGCTACTTTCATGAGACAATTTGGAAAGGAGTACCAAAGTTTTTGCGCCGGGTTGACACAGCTCTGAAGAACATTGGAGTAAATGAACGTATCCCATATAATGCCCCTGTTATTCAATTCTCCTCTTGGATGGGAGGAGATCGTGATGGTAATCCCAGGGTAACCCCTGAAGTTACAAGGGATGTATGTTTGCTTGCTAGAATGATGGCTGCTAATTTGTACTTCTCTCAGATAGAGGATCTCATGTTTGAGTTGTCTATGTGGCGCTGCAATGACGAGCTCCGTGCTCGAGCTCATGAACTCCATAGATCCTCAAAGAGAGATGCAAAACATTACATTGAGTTTTGGAAACAGATTCCTCCAAATGAGCCATATCGTGTTATTCTTGGTGATGTGAGGGACAAACTGTATAATACACGTGAACGAGCTCGCCAGTTATTAGCCAATGGCACCTCTGACATCCCTGAAGAGACAACCTTCACTAATGTTGAGCAGTTCCTGGAGCCTCTTGAACTCTGTTATAGATCACTCTGTGCATGTGGTGACCGACCAATAGCAGATGGAAGCCTTCTTGATTTCTTGCGTCAAGTTTCTACATTTGGTCTTTCTCTTGTAAGACTTGACATCCGTCAAGAGTCAGATAGGCACACTGACGTTATGGATGCAATTACAAAACACTTGGAAATTGGATCTTACCGAGAATGGTCTGAAGAACGCAGGCAGGAATGGCTTTTGTCTGAGCTCAGTGGGAAGCGCCCCCTCTTTGGCTCCGATCTTCCTAAAACAGAAGAAATTGCTGATGTTCTGGAAACCTTCCATGTCATTTCGGAACTTCCCTCAGATAACTTTGGTGCCTACATCATCTCAATGGCAACAGCCCCATCAGATGTGCTTGCTGTTGAGCTTTTACAACGTGAATGCCATGTGAAGCAGCCATTAAGGGTTGTCCCACTGTTTGAAAAGCTTGCTGATCTTGAGACTGCTCCTGCTGCAGTAGCCCGGCTTTTCTCTATAGACTGGTACAGAAACCGCATCAATGGGAAGCAAGAAGTTATGATTGGATACTCAGATTCAGGAAAAGATGCTGGTCGTCTTTCTGCAGCATGGGCACTATACAAGGCTCAAGAAGAACTCGTAAAGGTTGCAAAGGATTTTGGTATTAAGCTGACAATGTTCCATGGCAGAGGAGGGACAGTTGGAAGAGGAGGAGGTCCCACTCATCTTGCTATATTATCTCAACCACCAGATACTATTCATGGATCACTTCGGGTAACAGTTCAGGGTGAAGTTATTGAACAGTCATTTGGAGAGGAGCACTTGTGCTTTAGAACACTTCAACGTTTCACTGCTGCTACACTTGAGCATGGAATGCATCCTCCCGTGTCACCAAAACCAGAATGGCGTGCCCTTTTGGATGAGATGGCTGTCATTGCAACAAAGGAGTATCGCTCCATTGTTTTCCAAGAGCCTCGTTTTGTAGAATACTTCAGATGTGCAACTCCTGAGTTGGAGTATGGACGAATGAACATTGGCAGTCGTCCATCAAAACGAAAGCCAAGTGGAGGAATTGAATCACTGCGAGCCATTCCTTGGATTTTTGCATGGACACAAACAAGGTTCCATTTACCAGTATGGCTTGGCTTTGGAGCAGCATTCAAGCATGCAATTGAGAAGGATCCAAAGAATCTTCCATTGCTTCAGGATATGTACAATCAATGGCCTTTCTTCAGGGTCACCCTTGACTTGATTGAAATGGTTTTCGCCAAGGGAGATCCTGGAATTGCCGCCCTATATGACAAACTCCTAGTGACTGGAGAGTTGCAGCCGTTTGGAGAGCGTTTAAGAGCTAAATATGAAGAAACCAAGAGCTTCCTCCTCCGGGTTGCTGGGCACAAGGATCTTCTTGAAGGGGACCCTTACTTAAAGCAAAGACTTCGTCTTAGAGACTCATACATCACAACCCTTAATGTATTGCAAGCCTACACATTGAAGCGAATTCGTGACCCTGATTACCATGTGAAGTTGAGGCCACACTTGTCAAAAGACTACATGGAATCAAGCAAGCCAGCTGCAGAACTTGTCAAACTTAACCCAAAAAGCGAGTATGCTCCTGGTCTTGAAGACACTCTTATTTTGACAATGAAGGGTATAGCTGCTGGCATGCAAAACACTGGTTAA 2904 0.4421 MATTRNVEKMASIDAQLRLLAPRKVSDDDKLVEYDALLLDRFLDILQDLHGEDIRQTVQDCYELSAEYEGEHQPEKLEELGNMLTGLDAGDSIVISKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETFKKLVSELKKTPEEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRVRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRNPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGVNERIPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARAHELHRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGTSDIPEETTFTNVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLEIGSYREWSEERRQEWLLSELSGKRPLFGSDLPKTEEIADVLETFHVISELPSDNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLETAPAAVARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELVKVAKDFGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRALLDEMAVIATKEYRSIVFQEPRFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHAIEKDPKNLPLLQDMYNQWPFFRVTLDLIEMVFAKGDPGIAALYDKLLVTGELQPFGERLRAKYEETKSFLLRVAGHKDLLEGDPYLKQRLRLRDSYITTLNVLQAYTLKRIRDPDYHVKLRPHLSKDYMESSKPAAELVKLNPKSEYAPGLEDTLILTMKGIAAGMQNTG* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01073 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 170 181 IPR018129 -
Rops7g01073 967 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops7g01073 967 Pfam Phosphoenolpyruvate carboxylase 37 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops7g01073 967 Hamap Phosphoenolpyruvate carboxylase [ppc]. 24 967 IPR022805 GO:0006099|GO:0008964|GO:0015977
Rops7g01073 967 Gene3D Phosphoenolpyruvate/pyruvate domain 310 445 - -
Rops7g01073 967 PRINTS Phosphoenolpyruvate carboxylase signature 442 462 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops7g01073 967 PRINTS Phosphoenolpyruvate carboxylase signature 765 791 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops7g01073 967 PRINTS Phosphoenolpyruvate carboxylase signature 222 238 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops7g01073 967 PRINTS Phosphoenolpyruvate carboxylase signature 591 611 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops7g01073 967 PRINTS Phosphoenolpyruvate carboxylase signature 169 182 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops7g01073 967 PRINTS Phosphoenolpyruvate carboxylase signature 282 297 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops7g01073 967 PRINTS Phosphoenolpyruvate carboxylase signature 633 662 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops7g01073 967 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 34 967 IPR015813 GO:0003824
Rops7g01073 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 593 605 IPR033129 -
Rops7g01073 967 FunFam Phosphoenolpyruvate carboxylase 1 310 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01073 Rops-Chr7 14213698 14219849 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01073 7 14213698 14219849 Rops7g01073 7 14213698 14219849 ECH
Rops3g02053 3 37179021 37186310 Rops7g01073 7 14213698 14219849 PCT