Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00787 ATGGATCCAAACTTTGTTGGAAGCGGTTACAAATTCGACGCTGACGGGAACTTAGTGTTCTTCTCCGATCCAAACGAGTACCTCAACCTCGTCGATTTCACCACCACTGATCCTTATTTTTATCAATCCGATGTGGGACCAAGCACACTTGGTTTTGGTTCTTCTCCGAACACAATCATCAACTCCGATGGTGCCATGACCACGGTGGCGGATTCTTCACCGGAAGACACTGATTTTTCTGAAACGGTGAAGTACATAAGTCAGATTCTCATGGAAGAGGATTTTGAGCAAAAGCCATGTATGTGTTATGACCCTTTGAGTCTTCAACACACTGAGAAATCCTTCTATGATGCCCTTGAAGCAAAATTACCCCTTTCACCTAATCAACACCCTCTTGACATTTTAGAGAGCCCAGATGGGAATTGTTCAGCTACTGATTCTGGAAACAGTGCCAACTCTCAAGATTTGAAGCCTTCTTCACCTGATATTGTTTCTGGTGATTCACTTTCCCACGTGTCCTCTCAAGTTGTTCCTACACATGGTTTGACTAATATTAATGATGGGGTTTTGGATTTGGATTCTTCTGAAACCAAGCTCTTGGCACAAAATATTTTTAGTGATGCAGACTCTATGTTGCAGTTTAGAAGAGGGTTAGAGGAGGCTAGTAAGTTTCTTCCTCAAAGGCCTCAATTTTTCACTGGTTTGGAGAGCAGTTTGGTGTCTCAAGAGCCAAAGGGAGAGGGAGCAGTGAAGATGGAGGGTGGTGTTAGGGAGACTTCACAAGGGTTGTTGAAGAGTAGAAAGAATCACGAGCGCCGAGGTAGTGATGATGATGAAGAAAGAAGAAGCAACAAGCAATCTGCAGTTTGTGTTGAGGAGGAGAGTGAATTATCTGAAATGTTTGATAAGGTGTTGCTTAGTGTTGAAAATGTGCCACTTGGTGCTGAACAGCAAAATGGATCAGTCATAGAGAGAAACACACAGCAAGGGGAACGACCAAAGTCATCTGATGGAGGGAGGACTCGTTCCAAGAAACAAGGAAGGAAGAAAGAAACGGTGGATTTGAGGACCCTTTTGATTCAATGTGCACAAGCTGTGTCTGCCACTGACAACAGGACTGCTAATGAACTGTTAAAGCAGATTAGGCAGCATTCTTCTCCCTCAGGTGATGCATCACAGAGGTTGGCTCATTACTTTGCCAATGGACTAGAGGCACGCTTGGTTGGTGCTGGTACTGGAACCCAAATCTTTTATATGAACCCCAAGAAGTTCACTGCTGCTGATTTCCTCAAAGCTTACCAAGTTTTTATATCTGCTTGCCCTTTCAAGAAATTTGCACATTTCTTTGCAAATAAAATGATTATGAAAACAGCTGAAAAGGCAGAAACCCTTCATATTATTGATTTTGGTATCCTTTATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTGTCAAAAAGAGATGGTGGACCTCTCAAGCTACGCATGACAGGAATAGAGTATCCCCAACCTGGCTTTCGTCCAGCAGAAAGCATTGAGGAAACTGGTAGACGTCTAGCTAAATATTGCCAGCGTTTCAATGTTCCCTTTGAGTACAAGGCCATAGCATCACGAAACTGGGAAACCATTCCAATTGAAGACCTTCAAATTAAGAGCAATGAGGTACTTGCTGTGAACTGTTTGGTGAGGTTTAAGAATTTACTTGATGAGACAATTGAAGTGAACAGTCCTAGAAATGCAGTTCTGAAGTTAATTAGGAAGATAAATCCGGATATTTATGTTCAATCCATAGTAAATGGGGCTTATAATGCACCTTTCTTTGTCACACGCTTTAGGGAGGCACTATTCCATTATTCTGCAATTTATGATATGATTGATACTCTCATACCCCGTGCAAATGAATGGAGGTCGAAGATTGAGAGAGAGTTTTTGGGTCGGGAGATTATGAATGTCGTAGGATGTGAAGGTTATGAGAGGTTGGAGAGGCCTGAGATATACAAACAATGGCAGGCTAGGAATTCAAGGGCTGGTTTTAGGCAGCTCCCGCTGGATAAGGAGCTAATGACCAAATTTAGAGATAAGCGAAGAGAATGGTACAAGCACCACAGAGATTTTGACTTTGATGAAGATAATAACTGGATGCTTCAAGAACTCATCAAAGGTTCTGGTATACCTGCTATGCCCTATTTGCTTAACATTTAG 2202 0.4219 MDPNFVGSGYKFDADGNLVFFSDPNEYLNLVDFTTTDPYFYQSDVGPSTLGFGSSPNTIINSDGAMTTVADSSPEDTDFSETVKYISQILMEEDFEQKPCMCYDPLSLQHTEKSFYDALEAKLPLSPNQHPLDILESPDGNCSATDSGNSANSQDLKPSSPDIVSGDSLSHVSSQVVPTHGLTNINDGVLDLDSSETKLLAQNIFSDADSMLQFRRGLEEASKFLPQRPQFFTGLESSLVSQEPKGEGAVKMEGGVRETSQGLLKSRKNHERRGSDDDEERRSNKQSAVCVEEESELSEMFDKVLLSVENVPLGAEQQNGSVIERNTQQGERPKSSDGGRTRSKKQGRKKETVDLRTLLIQCAQAVSATDNRTANELLKQIRQHSSPSGDASQRLAHYFANGLEARLVGAGTGTQIFYMNPKKFTAADFLKAYQVFISACPFKKFAHFFANKMIMKTAEKAETLHIIDFGILYGFQWPILIKFLSKRDGGPLKLRMTGIEYPQPGFRPAESIEETGRRLAKYCQRFNVPFEYKAIASRNWETIPIEDLQIKSNEVLAVNCLVRFKNLLDETIEVNSPRNAVLKLIRKINPDIYVQSIVNGAYNAPFFVTRFREALFHYSAIYDMIDTLIPRANEWRSKIEREFLGREIMNVVGCEGYERLERPEIYKQWQARNSRAGFRQLPLDKELMTKFRDKRREWYKHHRDFDFDEDNNWMLQELIKGSGIPAMPYLLNI* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00787 733 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 293 695 IPR005202 -
Rops7g00787 733 MobiDBLite consensus disorder prediction 335 350 - -
Rops7g00787 733 MobiDBLite consensus disorder prediction 316 350 - -
Rops7g00787 733 MobiDBLite consensus disorder prediction 316 334 - -
Rops7g00787 733 MobiDBLite consensus disorder prediction 129 169 - -
Rops7g00787 733 Pfam GRAS domain family 355 715 IPR005202 -
Rops7g00787 733 MobiDBLite consensus disorder prediction 238 294 - -
Rops7g00787 733 MobiDBLite consensus disorder prediction 263 289 - -
Rops7g00787 733 ProSiteProfiles GRAS family profile. 346 731 IPR005202 -
Rops7g00787 733 MobiDBLite consensus disorder prediction 140 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00787 Rops-Chr7 10618844 10621296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00787 82 716 GRAS Transcription Factor Family AT1G07530 50.957 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops7g00787 GRAS 4.4e-105 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00787 7 10618844 10621296 Rops3g00790 3 9657370 9660120 PCT