Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02053 ATGGCATCCATTGATGCTCACCTTCGGCAATTGGTTCCAGCCAAAGTCAGTGAGGATGATAAACTTGTTGAGTATGATGCTCTGCTTCTGGATCGGTTCCTTGATATTCTTCAGGATTTACATGGAGAGGATCTGAAGGAAACGGTTCAAGAAGTATATGAGCTTTCTGCTGAATATGAAGGAAAGCACGACCCCAAGAAACTGGAAGAACTTGGGAATCTCATAACCAGTTTGGATGCTGGAGATTCTATTGTTGTTGCCAAGTCCTTTGCCCACATGCTTAACTTGGCTAACTTGGCTGAAGAGGTCCAGATTGCTCATCGTCGAAGGAACAAGTTGAAGAAAGGGGATTTTGCTGATGAGAACAATGCAACCACTGAATCAGATATTGAAGAAACTCTCAAGAAACTTGTGGTGGAAATGAAGAAGTCTCCTCAGGAAGTTTTTGATGCACTGAAAAACCAGACTGTTGATCTTGTTCTCACTGCTCATCCTACTCAATCAATTCGTAGATCTTTGCTTCAAAAGCATGGAAGGATACGAAATTGTTTAACACAATTGTATGCCAAAGACATCACTCCTGATGATAAGCAGGAGCTTGATGAGGCTCTACAGAGGGAGATCCAAGCTGCTTTCCGTACTGATGAAATCAGGAGGACCCCTCCAACCCCACAAGATGAGATGAGAGCAGGGATGAGCTACTTCCATGAAACAATTTGGAAGGGTGTACCCAGATTTCTTCGTCGTGTTGATACAGCTTTGAGGAATATAGGGATTAATGAACGTGTCCCATATAATGCTCCAGTTATTCAATTTTCCTCTTGGATGGGTGGTGATCGTGATGGCAATCCAAGAGTAACTCCTGAAGTGACAAGGGATGTTTGCTTATTGGCTAGAATGATGGCTGCTAATTTGTATTATTCCCAGATTGAGGATCTTATGTTTGAACTGTCAATGTGGCGCTGCAATGACGAGCTACGTGTCCGTGCAGAAGAACTTATCAGCTCTTCCAAGAAAGATGCAGTTGCAAAACACTACATAGAGTTTTGGAAAAACATTCCTCCAAATGAACCATATCGTGTGGTGCTGGGTGAAGTAAGGGATAGGCTCTACCAAACTCGTGAGCGCTCTCGCCATTTGCTAGCTAATGGGCACTCTGACATTCCAGAGGAAGGCACTTTCACCAATGTTGAGGAGTTCTTGGAACCTCTTGAACTCTGTTATAGATCACTCTGTGCTTGTGGTGATCGTGCAATTGCTGATGGAACTCTTCTGGATTTCTTGAGGCAAGTCTCCACTTTTGGACTGTCAATGGTGAGACTTGATATCAGGCAAGAATCAGACCGTCACACTGACGTGTTGGATGCCATTACCAAACACTTGGAAATTGGCTCCTACCAAGAATGGTCTGAAGAAAAACGCCAGGAATGGCTTTTGTCTGAATTGAGTGGCAAACGCCCCCTTTTTGGTCCTGACCTTCCCCAAACTGAAGAAATTAGAGATGTTCTGGACACATTTCATGTCATAGCAGAACTACCACCAGACAACTTTGGAGCATACATCATATCAATGGCAACTGCACCATCTGATGTGCTTGCAGTGGAACTTCTTCAACGCGAATGCCATGTCAAGAATCCATTAAGAGTTGTTCCATTGTTTGAGAAGCTTGCAGATTTGGAGGCTGCTCCTGCTGCTTTGGCTCGGTTGTTTTCCATAGACTGGTACAGAAACCGGATCAATGGGAAGCAAGAAGTCATGATTGGCTATTCTGATTCTGGTAAAGATGCTGGAAGGTTTTCTGCAGCATGGCAGCTATATAAGGCTCAAGAGGAACTTATAAAGGTAGCTAAGCAATATGGTGTTAAGTTAACAATGTTCCATGGTCGTGGAGGGACTGTTGGGAGAGGAGGTGGTCCCACTCACCTTGCTATCCTGTCTCAGCCTCCAGATACAATCCATGGATCACTTCGTGTGACTGTTCAAGGTGAAGTTATTGAGCAATCATTTGGAGAGCAGCACTTGTGTTTCAGAACACTTCAACGTTTCTCTGCAGCCACTCTAGAACATGGAATGCATCCTCCAATTTCTCCCAAACCAGAATGGCGTGCTTTGATGGATCAGATGGCTGTCATTGCCACTGAGGAATACCGTGCAATTGTATTCAAAGAACCACGTTTTGTTGAATATTTCCGCCTGGCTACACCAGAGTTGGAGTATGGCAGGATGAACATTGGAAGTAGACCAGCAAAGAGAAAGCCAAGTGGAGGTATTGAAACTCTCCGTGCTATACCTTGGATCTTTGCCTGGACACAGACAAGGTTTCATCTTCCAGTGTGGCTAGGCTTTGGGGCAGCATTCAAACATGTTATTGAGAAGGATGTTAGAAACCTTCATATGCTGCAGGAGATGTACAATCAATGGCCCTTCTTTAGGGTCACTATTGATTTAGTTGAAATGGTGTTTGCCAAGGGAGACCCAGGGATAGCTGGTCTCTATGATAGGCTCCTTGTTTCCAAAGATCTGTGGCCATTTGGAGAGCAGTTGAGGACCAAGTATGAAGAAACCAAGAAACTGCTCCTTCAGGTGGCTGGGCACAAGGATCTTCTTGAAGGAGACCCATACTTGAAGCAAAGACTACGTTTGCGTGATTCTTACATCACTACCCTAAATGTGTGCCAAGCTTACACATTGAAACGTATCCGTGATCCTAACTACAATGTGAAGCTACGCCCCCACATCTCTAAAGAGTCTATAGAGATAAGTAAACCTGCTGATGAACTCGTAACACTGAACCCAACAAGTGAATATGCCCCTGGTTTGGAAGACACCCTCATTCTCACCATGAAGGGTATTGCTGCTGGCCTGCAAAACACTGGTTAA 2880 0.4441 MASIDAHLRQLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYEGKHDPKKLEELGNLITSLDAGDSIVVAKSFAHMLNLANLAEEVQIAHRRRNKLKKGDFADENNATTESDIEETLKKLVVEMKKSPQEVFDALKNQTVDLVLTAHPTQSIRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPRFLRRVDTALRNIGINERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRAEELISSSKKDAVAKHYIEFWKNIPPNEPYRVVLGEVRDRLYQTRERSRHLLANGHSDIPEEGTFTNVEEFLEPLELCYRSLCACGDRAIADGTLLDFLRQVSTFGLSMVRLDIRQESDRHTDVLDAITKHLEIGSYQEWSEEKRQEWLLSELSGKRPLFGPDLPQTEEIRDVLDTFHVIAELPPDNFGAYIISMATAPSDVLAVELLQRECHVKNPLRVVPLFEKLADLEAAPAALARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRFSAATLEHGMHPPISPKPEWRALMDQMAVIATEEYRAIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIEKDVRNLHMLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAGLYDRLLVSKDLWPFGEQLRTKYEETKKLLLQVAGHKDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPNYNVKLRPHISKESIEISKPADELVTLNPTSEYAPGLEDTLILTMKGIAAGLQNTG* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02053 959 Pfam Phosphoenolpyruvate carboxylase 28 959 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops3g02053 959 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 585 597 IPR033129 -
Rops3g02053 959 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 160 171 IPR018129 -
Rops3g02053 959 PRINTS Phosphoenolpyruvate carboxylase signature 272 287 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops3g02053 959 PRINTS Phosphoenolpyruvate carboxylase signature 757 783 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops3g02053 959 PRINTS Phosphoenolpyruvate carboxylase signature 159 172 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops3g02053 959 PRINTS Phosphoenolpyruvate carboxylase signature 625 654 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops3g02053 959 PRINTS Phosphoenolpyruvate carboxylase signature 434 454 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops3g02053 959 PRINTS Phosphoenolpyruvate carboxylase signature 583 603 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops3g02053 959 PRINTS Phosphoenolpyruvate carboxylase signature 212 228 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops3g02053 959 Coils Coil 96 116 - -
Rops3g02053 959 Gene3D Phosphoenolpyruvate/pyruvate domain 300 437 - -
Rops3g02053 959 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 16 959 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops3g02053 959 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 25 959 IPR015813 GO:0003824
Rops3g02053 959 FunFam Phosphoenolpyruvate carboxylase 1 300 437 - -
Rops3g02053 959 Hamap Phosphoenolpyruvate carboxylase [ppc]. 15 959 IPR022805 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02053 Rops-Chr3 37179021 37186310 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02053 3 37179021 37186310 Rops7g01073 7 14213698 14219849 PCT