Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02042 ATGCCTTCCTCACCTAAATATCACTCCTCATACGCCCGTCACGCCTCCACCGCCTTCTCGTCTCGCAGATGCGCCGCCCTTGCCGTCCTATCCGCCATCGTTATCATCGGCGTTGCCACAACTCTTCTCCGGTCTATTCAGGGAAACCGCTGCCCCATTTCACCCCCCAGATCGGTTAGGGTCGCTTGGGAACATGCCGGCGCCGGCACCGGCACCGTCGGCAATGGGGTTTCCAATAGGCATAAGGTGATGGGGTTTGTGGGTGTTCAAACTGGGTTTGGATCTGTTGGTAGGAGAGAATCGTTGAGGAAGACTTGGTTTCCCTCTGATCGACAAGGGCTTGAACGCCTGGAAGAAGCCACTGGGTTGGCTTTTAGGTTTGTCATTGGTAGAACAAATGATAAAGCAAAGATGTCTGCACTTCAGAAGGAAGTAGCAGAATATGATGATTTCATTCAGTTGGATATCCAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTAGCTTTCTTCAAAGCTGCTTATGCTCTTTTTGATGCTGATTTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTTTCATTGCTACTGGCAAAAGAGCGATCTCACCCCCAGACTTACATAGGATGCATGAAAAAGGGGCCTGTTTTCACTGATCCAAAACTCAAATGGTATGAGCCACTATCATATTTGCTTGGAAAGGAGTATTTTCTTCATGCTTATGGTCCTATATATGTTCTTTCTGCTGATGTTGTTTCAAGCTTGGTTGCTCTTAGGAATGACAGTTTCCGGATGTTCAGCAATGAGGATGTTACTATTGGAGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATAATCATGAACTTTGTGCTCCAGACTGTACAGCCACATCTATTGCTGTGTGGGATATTCCTAAGTGTTCAGGCCTCTGTAATCCAGAAAAGAAAATGTTGGAACTCCATCAAAAGGAGAGCTGCTCAAAGAGCCCAACTCTGGAATCGGATGATGAATAG 1029 0.4606 MPSSPKYHSSYARHASTAFSSRRCAALAVLSAIVIIGVATTLLRSIQGNRCPISPPRSVRVAWEHAGAGTGTVGNGVSNRHKVMGFVGVQTGFGSVGRRESLRKTWFPSDRQGLERLEEATGLAFRFVIGRTNDKAKMSALQKEVAEYDDFIQLDIQEEYSKLPYKTLAFFKAAYALFDADFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSYLLGKEYFLHAYGPIYVLSADVVSSLVALRNDSFRMFSNEDVTIGAWMLAMNVNHENNHELCAPDCTATSIAVWDIPKCSGLCNPEKKMLELHQKESCSKSPTLESDDE* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02042 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 79 299 IPR002659 GO:0006486|GO:0016020|GO:0016758
Rops3g02042 342 Gene3D - 83 310 - -
Rops3g02042 342 FunFam Hexosyltransferase 82 313 - -
Rops3g02042 342 Pfam Galactosyltransferase 98 291 IPR002659 GO:0006486|GO:0016020|GO:0016758
Rops3g02042 342 SUPERFAMILY Nucleotide-diphospho-sugar transferases 173 283 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02042 Rops-Chr3 36959629 36968335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02042 14 342 Glycosyltransferase AT1G53290 71.302 0.0 513
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02042 3 36959629 36968335 Rops3g02042 3 36959629 36968335 ECH