Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01493 ATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAACCCTTCAAAGGGGGACATCTCGGTCTGCAGCTCATGCCTGGTATGACAGATCGTGATACAAAATCATTTTTACCTGGTCGTGATCCAGCTATGTTAGGTGCAAATGGAACTTTTCACCAAATGCCAACTCCGATGAACTATGTCAGAGATAATTGGATAAGCCAGAGAGAGAGGATTTTTCATATGCAGCCCCCGAATCCTAATTATACTGTTCTTCCAGAATCATCAGGAGCTCCCTCATTGCAAATTATACAGCCTCCTCCTGATACATCAAGAGATGAGAAGGTGGATGATAGAATTGAAGAATTAGTTGTTAAAAAGGAAGGTGGCCAATCAAAGAAAAGGCAAAGTAAGGGTGCTCTCACGGCTCCAAAAGCTAAGAAACCTAGGAAGCCAAAGAATGATAGCAGTGTTCCAGTTCAACGTGTGAAACCACAGAAGAAGACCATGGAACTTGTAATAAATGGAATTGATATGGACCTTTCTGGTCTACCAGTTCCAGTTTGTTCATGTACCGGGACTCCTCAACAGTGTTATCGTTGGGGCTGTGGAGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCAATATATCCTTTGCCGATGAGCATAAAAAGGCGTGGTGCAAGGATAGCTGGCCGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTTTTAGAGAAACTTGCAGCTGAAGGTTATAATTTTGCTAACCCTATTGATTTGAGGACTCATTGGGCTAGACATGGCACCAACAAGTTTGTCACTATCAGGTAG 819 0.4274 MDDDVLNMPNWGYYEPFKGGHLGLQLMPGMTDRDTKSFLPGRDPAMLGANGTFHQMPTPMNYVRDNWISQRERIFHMQPPNPNYTVLPESSGAPSLQIIQPPPDTSRDEKVDDRIEELVVKKEGGQSKKRQSKGALTAPKAKKPRKPKNDSSVPVQRVKPQKKTMELVINGIDMDLSGLPVPVCSCTGTPQQCYRWGCGGWQSACCTTNVSIYPLPMSIKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTIR* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01493 272 SMART GAGA_bind_2 1 272 IPR010409 -
Rops2g01493 272 MobiDBLite consensus disorder prediction 105 129 - -
Rops2g01493 272 MobiDBLite consensus disorder prediction 79 160 - -
Rops2g01493 272 Pfam GAGA binding protein-like family 1 272 IPR010409 -
Rops2g01493 272 PANTHER - 1 272 IPR010409 -
Rops2g01493 272 MobiDBLite consensus disorder prediction 83 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01493 Rops-Chr2 21967662 21969448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01493 1 272 BBR or BPC Transcription factor family AT2G01930 58.966 4.77e-106 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Rops2g01493 GAGA_bind 5e-104 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01493 2 21967662 21969448 Rops2g01493 2 21967662 21969448 ECH