Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00169 ATGGGGGACATGAAAGATAAGGTAAAGGGGTTCATGAAGAAAGTCAACAACCCGTTTTCCTCATCATCATCATCATCTGGCAAATTCAAAGGCCAAGGTAGAGTCTTGGGATCTTCTTCTTCTTCTGCACCCTCTAATTCCATTCCTACCCTTCGCCCCACTCCCACTCAGAATCCCAATTCAAAACCCCGTTCAGCTTCAACAAATCCTGAACCCTTGCCCCAGAAAACGATCGCTTCAGATCATATTAAAACCGAGAGGGCTCCCAAACAAGGTGATGGTTTTGACCCTTTTGATTCTTTGGTCACTTCTTCCAAGAGATCTCAAAATGGGTATTCACTGAATGTTTTTGAATGCCCCATTTGTAAACAAGCGTTTAGATCTGAAGAAGAGGTTTCTGTACATGTGGATGGTTGTTTGAGTGACCCAGTTGAAAAGGGTGTCTCAGAATTGCAAGAGAGTGAAGTTGAGTCTGATAGTGAATTGGAAGTTTGTGTTGGTACTTACATTTCAGGGAAACCATCTGAGGGATCAGTTGATGTTGTTCTAAAACTGTTGAGGAATATTTCTAGGGAGCCTGAGAATGTCAAGTTCAGGAAGATTAGGATGAGTAATCCAAAGATAAAAGAGGCTATTGGTGATGTTACTGGTGGAGTTGAGTTGCTTAACTTTCTAGGATTTGAACCCAGGGAGGAGAATGGGGAGACATGGGCAGTGATGGAGGTTCCTACAGAGGAGCAAGTAAAGTTAATTAAGAAAGCAATAGTGTTATTGGAATCACAACTGGTACAAGAACCTCCAAAGAGAGAGAATTTGATGTCTACAACTTCTGCTGAGAAAGATGCAAAGTCTGAACCAAAGCAGGTTGACAGACAGGTGAAGGTCTTCTTTGCTGTCCCTGAAAGCGTTGCAGCTAAAATTGAGCTACCAGATTCCTTCTATAATCTTTCAGCTGAAGAGGTGAGAAGAGAAGTTGAGTTAAGGAGAAAAAAGATTGAAGAGTCTCAGCTTTTAATCCCTAAGTCACTTAAAGAAAAGCAAGCTAAAGCTGCCAGGAAGAGATACACCAAAACTATCATTAGGATTCAGTTTCCAGATGGAGTTGTACTTCAAGGTGTATTTTCTCCATGGGAACCAACCACTGCTCTCTATGAGTTTGTCAGCTCCGCATTAAAAGAACCAGGTTTGGAATTTGAGCTGATGCATCCTGTAGTTGTCCAACGGCGGGTGATCCCTCATTTTCCAAAAGCAGGGGGAAAGGCTAAAACAATAGAGGAAGAGGACCTGGTACCTTCTGCTTTAATTAAGTTCAAGCCCCTGGAAACAGATTCTGTTGTTTTCACCGGTCTCAAAAATGAATTGCTTGAAATCAGTGAACCCCTTGTAAATAGTTAA 1395 0.4194 MGDMKDKVKGFMKKVNNPFSSSSSSSGKFKGQGRVLGSSSSSAPSNSIPTLRPTPTQNPNSKPRSASTNPEPLPQKTIASDHIKTERAPKQGDGFDPFDSLVTSSKRSQNGYSLNVFECPICKQAFRSEEEVSVHVDGCLSDPVEKGVSELQESEVESDSELEVCVGTYISGKPSEGSVDVVLKLLRNISREPENVKFRKIRMSNPKIKEAIGDVTGGVELLNFLGFEPREENGETWAVMEVPTEEQVKLIKKAIVLLESQLVQEPPKRENLMSTTSAEKDAKSEPKQVDRQVKVFFAVPESVAAKIELPDSFYNLSAEEVRREVELRRKKIEESQLLIPKSLKEKQAKAARKRYTKTIIRIQFPDGVVLQGVFSPWEPTTALYEFVSSALKEPGLEFELMHPVVVQRRVIPHFPKAGGKAKTIEEEDLVPSALIKFKPLETDSVVFTGLKNELLEISEPLVNS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00169 464 SUPERFAMILY Ubiquitin-like 328 437 IPR029071 -
Rops2g00169 464 Gene3D - 347 440 - -
Rops2g00169 464 ProSiteProfiles UBX domain profile. 353 437 IPR001012 GO:0005515
Rops2g00169 464 FunFam UBX domain-containing protein 6 347 438 - -
Rops2g00169 464 Gene3D - 171 260 - -
Rops2g00169 464 CDD PUB 170 260 - -
Rops2g00169 464 MobiDBLite consensus disorder prediction 1 102 - -
Rops2g00169 464 MobiDBLite consensus disorder prediction 15 75 - -
Rops2g00169 464 Pfam PUB domain 176 251 IPR018997 -
Rops2g00169 464 SUPERFAMILY PUG domain-like 174 260 IPR036339 -
Rops2g00169 464 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 463 - -
Rops2g00169 464 Pfam UBX domain 354 403 IPR001012 GO:0005515
Rops2g00169 464 SMART c2hc_5 116 140 IPR006642 GO:0003677|GO:0006281
Rops2g00169 464 SMART PGNneu 177 244 - -
Rops2g00169 464 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00169 Rops-Chr2 2463000 2466783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00169 1 385 C2H2 Transcription Factor Family AT2G01650 58.543 4.63e-148 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00169 2 2463000 2466783 Rops2g00169 2 2463000 2466783 ECH