Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00168 ATGTCAAACACAAACACAGACAAGGGCATGTTTCTTCTTCTTCTTTTCTTTCTTCTCACACTTTCAACCATGACAACCCCATCAACCTCTGCCACCGATTCTTTCATCTTTGGTGGTTGTTCTCAGCTGAAGTACTCACCAGGTTCCTCTTATGAGCACAGTGTCAACTCGATACTCACTTCCCTGGTTAACTCAGCCACGTTTACCAACTACAACAACTTCACCATTCAAGGCACCGCCGTGTCGGACACCGTCTACGGCCTCTACCAGTGCCGTGGGGACCTCAACAACGACCAGTGCTCGCGTTGTGTGGCGCGTGCGGTGAGTCAACTCGGCACTCTCTGCCTCGACTCGTGCGGTGGCGCGTTGCAGCTCGAGGGATGTTTCGTGAAGTACGATAATGTCACGTTTTTAGGAGTGGAGGACAAGACCGGGGTGCTCAAGAAATGTGGACCGTCCATTGGGTTGACTTCTGATGCGTTGACCCGAAGAGATGCTGTGTTGGAGTATTTACAGACGTCTGACGGGACGGCTTACAAAACGTTCAGAACCAGTGGGTCTGGGGATTATCAGAGTGTGGCGCAGTGCACTGGGGATTTGAGTCCCACTGAGTGCCAGGATTGTCTCTCTGATTCGATCCAACGGTTGAAAACAGAGTGTGGGGCCTCCACTTGGGGGGAGATGTATTTGGCCAAGTGCTACACGCGCTACTCCGAAGGTGGGACTCACTCGCGCGGTAGTAACGATGATAGCAATCACAATGATGATGAGATTGAGAAGACACTCGCCATACTAATTGGACTCATTGCCGGGGTTGCTCTAATCATCGTTTTCCTCTCCTTCTTGTCCAAAGTGTGTGAAAAGCACAAAGGTGGTAAATAA 882 0.5068 MSNTNTDKGMFLLLLFFLLTLSTMTTPSTSATDSFIFGGCSQLKYSPGSSYEHSVNSILTSLVNSATFTNYNNFTIQGTAVSDTVYGLYQCRGDLNNDQCSRCVARAVSQLGTLCLDSCGGALQLEGCFVKYDNVTFLGVEDKTGVLKKCGPSIGLTSDALTRRDAVLEYLQTSDGTAYKTFRTSGSGDYQSVAQCTGDLSPTECQDCLSDSIQRLKTECGASTWGEMYLAKCYTRYSEGGTHSRGSNDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKHKGGK* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00168 293 Gene3D - 158 240 IPR038408 -
Rops2g00168 293 Gene3D - 31 137 IPR038408 -
Rops2g00168 293 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Rops2g00168 293 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 12 286 - -
Rops2g00168 293 Pfam Salt stress response/antifungal 167 238 IPR002902 -
Rops2g00168 293 Pfam Salt stress response/antifungal 40 134 IPR002902 -
Rops2g00168 293 FunFam Cysteine-rich repeat secretory protein 60 158 240 - -
Rops2g00168 293 ProSiteProfiles Gnk2-homologous domain profile. 142 242 IPR002902 -
Rops2g00168 293 FunFam cysteine-rich repeat secretory protein 3 32 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00168 Rops-Chr2 2425781 2428465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00168 12 237 Pollen Coat Proteome AT4G20670 24.481 1.15e-15 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00168 2 2425781 2428465 Rops2g00168 2 2425781 2428465 ECH