Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00150 ATGGAGTCTAAGACTCTGCGTTTCATAACCCACCAATCAATTTTCTCCACCGTTGGATCTGGGGACCTTGATGGGGTGAAGCAACTGGTGGAGCAGCTTAACAAGGATGATGATGACGGGTCATCGCTTTCTGAAGTCATGTCCCTTCAGAACGATGCCGGTGAAACTGCGCTTTACATCGCTGCACAGCATAATCTATATGAGATTTTCAGCTTCTTGCTCAAGTTTTGTGACTTTGAGGTTGTTAAGATTCGGTCCAAGTCTGATATGAATGCCTTTCATGTTGCAGCCAAGCGTGGCCATCGTGATATTGTGAAGGAGCTTTTGAGTACTTGGCCTGAGGTTTGTAAGTTATGTGACTCCTCAAACACCAGCCCTCTTTATTCTGCTGCCGTTCAAGACCACTTGGAGGTGGTGAATGCTGTTTTGGATGTTGATGTCAGTTCCATGTTTATAGTTAGGAAAAATGGCAAAACTTCATTACACAATGCTGCTAGGTATGGCGTCCTTCGCATTGTGAAAACACTTATTGCCCGGGATCCAGGAATAGTCTGCATCAAAGATAAAAAAGGTCAAACTGCACTGCATATGGCTGTCAAAGGACAGTGTATAGCAGTGGTGGAGGAGATATTACTAGCTGATCCTACCATATTGAATGAAAGAGATAAGAAGGGTAATACAGCTCTTCACATGGCTACAAGGAAATGCCGTTCACAGATAGTGAACCTTCTGCTAAGCTATGCTGCTATGGATGTTAATGCCATCAATAAGCAGCAAGAAACAGCCTTGGATTTGGCAGATAAACTGCCATATGGAGATTCTGCTTTAGAAATCTCAGAAGCCCTTACAGAATATGGTGCCAAGCATGCCAGGCATGTTGGTAAAGTAGATGAAGCCATGGAACTTAAAAGAACCGTGAGTGATATTAAGCATGAGGTGCAGTCACAACTTATACAAAATGAAACAACTCGCAAACGAGTTTCTGGTATTGCTAAGGAATTGAAGAAACTTCATAGAGAAGCAGTTCAAAACACCATTAATTCAGTCACACTTGTTGCTGTCCTTTTTGCCTCAATAGCATTCTTGGCTATATTCAACTTGCCTGTTGTTGTTGTTCAAATCACTTTGGTAGCATGGGACACTGGGGCTCAAAAGCAGATTGTGTCAGTGGTTAACAAGCTGATGTGGGCTGCATGTACTTGCACTTGTGGTGCTTTTCTAGCAATAGCTTTTGAGGATGTTGGAAAGAAAACATGGATGGCTATTACCATTACCCTTTTGGGAGTACCAATTCTGGTTGGGACTCTGGCAAGCATGTGCTACTTTGTTTTCAGACGACATTTTGGGATTTTCTGCGGTGATTCCCAGAGACGGATCAAGAAAGCAAGTGGAAGTAAATCTTTTTCATGGTCTTATTCTGCAAATATCTCGGATATAGACGAGTATAATTCTGATATTGAGAAGATCTATGCTTTGTAA 1479 0.4226 MESKTLRFITHQSIFSTVGSGDLDGVKQLVEQLNKDDDDGSSLSEVMSLQNDAGETALYIAAQHNLYEIFSFLLKFCDFEVVKIRSKSDMNAFHVAAKRGHRDIVKELLSTWPEVCKLCDSSNTSPLYSAAVQDHLEVVNAVLDVDVSSMFIVRKNGKTSLHNAARYGVLRIVKTLIARDPGIVCIKDKKGQTALHMAVKGQCIAVVEEILLADPTILNERDKKGNTALHMATRKCRSQIVNLLLSYAAMDVNAINKQQETALDLADKLPYGDSALEISEALTEYGAKHARHVGKVDEAMELKRTVSDIKHEVQSQLIQNETTRKRVSGIAKELKKLHREAVQNTINSVTLVAVLFASIAFLAIFNLPVVVVQITLVAWDTGAQKQIVSVVNKLMWAACTCTCGAFLAIAFEDVGKKTWMAITITLLGVPILVGTLASMCYFVFRRHFGIFCGDSQRRIKKASGSKSFSWSYSANISDIDEYNSDIEKIYAL* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00150 492 Pfam Ankyrin repeats (3 copies) 93 179 IPR002110 GO:0005515
Rops2g00150 492 Pfam Ankyrin repeats (3 copies) 188 254 IPR002110 GO:0005515
Rops2g00150 492 Gene3D - 9 150 IPR036770 -
Rops2g00150 492 SUPERFAMILY Ankyrin repeat 14 287 IPR036770 -
Rops2g00150 492 ProSiteProfiles Ankyrin repeat profile. 224 249 IPR002110 GO:0005515
Rops2g00150 492 ProSiteProfiles Ankyrin repeat region circular profile. 224 249 - -
Rops2g00150 492 SMART ANK_2a 88 117 IPR002110 GO:0005515
Rops2g00150 492 SMART ANK_2a 122 152 IPR002110 GO:0005515
Rops2g00150 492 SMART ANK_2a 190 219 IPR002110 GO:0005515
Rops2g00150 492 SMART ANK_2a 53 81 IPR002110 GO:0005515
Rops2g00150 492 SMART ANK_2a 156 185 IPR002110 GO:0005515
Rops2g00150 492 SMART ANK_2a 224 254 IPR002110 GO:0005515
Rops2g00150 492 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 369 471 - -
Rops2g00150 492 ProSiteProfiles Ankyrin repeat profile. 156 177 IPR002110 GO:0005515
Rops2g00150 492 ProSiteProfiles Ankyrin repeat region circular profile. 156 177 - -
Rops2g00150 492 Gene3D - 151 306 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00150 Rops-Chr2 2238299 2241942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00150 1 492 Miscellaneous Gene Families AT2G01680 65.234 0.0 669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00150 2 2238299 2241942 Rops2g00150 2 2238299 2241942 ECH