Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00147 ATGTCGTGGGAAGATGAGATTGTGATGCGTGATGTCACGAATGCGGGTCTTGTTGTCAGTGATCGCATTGGTCGCGAAGTTTCGTCTCAGCTCGACCTCGAAGAAGCTCTAGAAGCCTCCAGATACGCTAGCCATCCTTACTCCACTCACCCTAGAGAGTGGCCCCCTTTAGTTGAGGTAGTGAATACCTGGGAGTTGCCTCCTGTGCTTATTGAAAGATACAATGCAGCTGGTGGGGAAGGAACTGCTTTTTGTGGAATATTTCCAGAAATACGTAGGGCATGGGCATCCGTGGACAATTCCTTGTTTCTTTGGCGTTTTGATAAGTGGGATGGCCAATGTCCTGAATATAGTGGGGAGGAACAAGCTATTTGTGCTGTTGGTCTTGCAAAATCAAAACCTGGTGTTTTTGTTGAAGCTATCCAATATCTTTTAGTTTTAGCGACGCCTGTTGAGTTAATTTTAGTAGGAGTATGCTGCTCTGGAGGAGCAGATGGTTCAGATCCATTTGCAGAAGTTTCACTACAACCATTGCCAGAGTATACAACACCATCTGATGGGGTTACTATGACATGTGTAGCATGTACTGACAAGGGACGCATTTTCCTTGCTGGTCGTGATGGCCACATATACGAGCTTCATTACTCAACTGGTTCAGGATGGCAAAAGCGCTGCAGAAAAACCTGCATCACTTCTGGTCTAGGAAGTGTAATTTCAAGATGGGTCATACCAAATGTGTTCAATTTTGGAGTGGTTGACCCTATTGTTGAAATGGTTTTTGACAATGAGAGACAAATATTGTATGCACGAACTGAAGAGATGAAGCTTCAGGTTTATGTTCTAGGACTAAATGGTGATGGCCCATTAAAGAAAGTGGCTGAAGAAAGGAATCTTGTCAATCAGAGGGATGCACATTATGGAGGTAGACAATCAACAGGATCAAGAGTCTCAAGTCGATCACCGAAGCCATCTATTGTTTGCATTTCACCTTTATCTACACTTGAATCCAAGTCTCTACATCTTGTTGCTGTTTTATCAGATGGCAGAAGGATGTATCTATCTACCTCTCCTTCTAGTGGAGGCCTGAATGGGTTCAACACCAACCATCACAAACCTAGCTGTCTAAAGGTTGTCACAACAAGGCCTGCTCCTCCTTGGGGTGTTAGTGGTGGTCTCACCTTTGGAACCATGGCTCTTGCGGGTAGACCTCAGAATGAGGATCTCTCGCTGAAAGTTGAGGCAGCCTATTATTCTGCTGGAACTCTTATCCTTTCTGATGCATCGCCTCCAACTATGCCTTCACTCCTTGTTTTGAACAGGGATTCTAGCACACAGTCATCACCATCAGGTAATCTAGGGACAGGTTCGAGGAGTTCCCGGGCATTACGGGAATCTGTATCTTCTTTACCAGTTGAAGGACGAATGCTTTCTGTGGCAGATGTTTTACCTTTTCCAGATACTGCAGCTACTGTGCAGTCTCTATATTCAGAAATTGAGTTTGGTGGTTATGATAGCTCAATGGAATTGTGTGAAAGGGTGTCTGGCAAGCTCTGGGCGAGGGGTGACCTCTCAACCCAACATTTATTGCCAAGGAGGAGGATTGTCATCTTCAGCACCATGGGCATGATGGAAATTGTTTTTAACAGGCCATTAGACATTCTAAGGCGACTATTAGAGTCCAATTCTCCACGATCAGTTTTAGAAGATTTCTTCAATCGTTTCGGTGCTGGTGAGGCAGCTGCAATGTGTTTAATGCTAGCTGCAAGAATAGTGCATTCTGAAAACCTTATTAGCAATGTTATTGCTGAGAAGGCAGCTGAAGCTTTTGAGGACCCAAGAGTTGTTGGCATGCCCCAACTTGAAGGTAGTAGTGCATTATCAAACACAAGAACTGCTGCTGGTGGATTTAGCATGGGCCAGGTTGTTCAGGAGGCTGAGCCTGTTTTTTCAGGTGCACATGAAGGGCTCTGTTTGTGTTCATCTAGATTGCTTTTTCCTCTGTGGGAACTTCCTATAATGGTTGTAAAAGGAAGTTTAGGTCCTTCAGGCACTTTATCTGAAAATGGGGTAGTTGTATGCAGACTCTCTTCTGGGGCTATGCAAGTCCTTGAACACAAACTCCGATCTTTAGAGAAATTCTTAAGATCTAGAAGGAATCAGAGGAGAGGACTTTATGGCTGTGTAGCAGGTTTAGGAGATCTGAGTGGTTCCATTCTATATGGTAGTGGTTCTGCATTAGGTGCTGGTGATCGAAGTATGGTAAGAAACTTGTTTGGTGCATATTCCAGAAATATGGAGTCCAATGGTGGTAGAACAACTAATAAAAGGCAAAGGTTGCCATACAGTCCTGCAGAATTAGCTGCCATGGAGGTTAGGGCAATGGAGTGCATTAGGCAGTTGCTCCTTAGATCTGGTGAAGCCCTGTTTTTGCTTCAACTTCTTTCACAGCATCACGTCACTCGTTTGATTCAGGGATTTGATGCTAACCTTCAACAGGCATTAGTTCAGTTAACATTTCATCAACTAGTTTGTTCTGAGGAGGGTGACCATCTTGCTACAAGACTTATATCTGCTCTAATGGAGTATTATACTGGTCCTGATGGCAGGGGAACTGTAGATGACATTAGTAGGAGATTAAGAGAGGGTTGTCCAAGCTACTATAAGGAGTCTGATTACAAATTTTTCTTAGCTGTGGAAGCCTTGGAGAGAGCTGCTGTAACTGTGGATGCTAAGGAAAAGGAAAATCTTGCAAGGGAGGCATTGAATTCCTTAAGTAAAGTTCCAGAGTCTGCAGACTTACGTACTGTTTGCAAACGTTTTGAGGACTTAAGGTTTTATGAAGCTGTAGTGTACTTACCTCTTCAAAAGGCACAGGCTCTCGACCCTGCAGGTGATGCTTATAATGATGAAATTGATGCTACTGTCAGAGAACAAGCACTTGCTCAGCGTGAGCAGTGTTATGAGATAATTATCAGTGCTTTGCGGTCTCTTAAAGGTGACACCTTGCTGAAGGAGTTTGGCTCTCCCATCAGATCTGCTGCTTCACAAGCTGCACTTGATCCAGCCTCTCGAAAAAAATATATAAGCCAAATTGTTCAGCTAGGTGTCCAATCTCCTGACAGAATTTTCCATGAGTATCTTTACCAGGCCATGATTGATTTAGGTCTAGAGAATGAATTATTAGAGTATGGAGGTCCTGACCTGTTGCCATTTTTACAAAGTGCTGGTCATAAACCCATACATGAGGTTCGTGCTGTGACAGCAACAACTTCTCCAATGGGGCAATCAGGAGCACCTATGTCATCTAATCAAGTCAAGTACTATGAACTTTTGGCACGGTATTATGTCTTGAAGCGGCAACATATGCTTGCAGCTCATGCATTGCTAAGGCTAGCTGAAAGGCGCTCTATTGATGGAGTTCCTACTCTAGAACAGAGGTGTCAATACCTAAGTAATGCAGTTCTACAGGCAAAAAATGCAACTAATAATGATGGGTTGGTAGGTTCTACTCGGAGTTCCATTGATAGTGGATTCCTAGATTTGCTTGAAGGGAAGCTCGCTGTTCTTCGGTTTCAAATAAAAATCAAAGAGGAACTAGAGGCTATGGCTTCCAGATCTGAGGTTTTACATAGCACATCCGATTCTGCCCAAAATGGGGTAGCACCTGAAGGAAGTTCAACTGCTGATGCTAATTTTGTAAATGCAACACGAGAGAAAGCCAAAGAGCTATCATCAGATGTAAAAAGCATAACTCAGTTATATAATGAATATGCTGTTCCCTTTGAGCTCTGGGAGATATGCCTGGAGATGCTGTACTTTGCCAGTTATTCTGGTGATAGTGACAGCAGCATTGTCAGAGAGACATGGGCTAGACTTATAGATCAAGCTATTTCTAGAGGTGGCATTGCTGAAGCTTGCTCAGTATTAAAGAGGGTCGGGCCCCGCATTTATCCGGGCGATGGAGCTATTTTACCTCTTGACATTATCTGTCTTCTCCTAGAGAAGGCTGCACTGGAGAGGTTAAATTCAGGGGTTGAAATCGTTGGAGATGAAGACGTTGCAAGAGCCCTTGTTTCTGCTTGTAAGGGTGCAGCTGAACCTGTATTGAACGCATATGATCAATTATTATCAAATGGGGCTATTTTGCCATCCCCAAATCTTAGATTGCGCATGCTGAGATCAGTTCTAGTGGTACTCCGTGAGTGGACCATGTCTGCATATTCACAGAGGATGGGTACTAGTGCCGTTGGATCCTCCCTAATACTAGGCGGAGGATTCTCATGGGAACGTACAGTTGATAGCCAAGGAATTCGGGACAAGATCACAAGTGCAGCAAACAGGTATATGACTGAAGTGCGGAGGTTAGCCCTTCCTCAGAACCAAACAGAAGTTGTCTACCGAGGCTTTAAAGAACTTGAAGAGTCGCTTATAAGTCCTTCATTTGATCGATTTTGA 4455 0.4384 MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEVVNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGADGSDPFAEVSLQPLPEYTTPSDGVTMTCVACTDKGRIFLAGRDGHIYELHYSTGSGWQKRCRKTCITSGLGSVISRWVIPNVFNFGVVDPIVEMVFDNERQILYARTEEMKLQVYVLGLNGDGPLKKVAEERNLVNQRDAHYGGRQSTGSRVSSRSPKPSIVCISPLSTLESKSLHLVAVLSDGRRMYLSTSPSSGGLNGFNTNHHKPSCLKVVTTRPAPPWGVSGGLTFGTMALAGRPQNEDLSLKVEAAYYSAGTLILSDASPPTMPSLLVLNRDSSTQSSPSGNLGTGSRSSRALRESVSSLPVEGRMLSVADVLPFPDTAATVQSLYSEIEFGGYDSSMELCERVSGKLWARGDLSTQHLLPRRRIVIFSTMGMMEIVFNRPLDILRRLLESNSPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENLISNVIAEKAAEAFEDPRVVGMPQLEGSSALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPIMVVKGSLGPSGTLSENGVVVCRLSSGAMQVLEHKLRSLEKFLRSRRNQRRGLYGCVAGLGDLSGSILYGSGSALGAGDRSMVRNLFGAYSRNMESNGGRTTNKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDANLQQALVQLTFHQLVCSEEGDHLATRLISALMEYYTGPDGRGTVDDISRRLREGCPSYYKESDYKFFLAVEALERAAVTVDAKEKENLAREALNSLSKVPESADLRTVCKRFEDLRFYEAVVYLPLQKAQALDPAGDAYNDEIDATVREQALAQREQCYEIIISALRSLKGDTLLKEFGSPIRSAASQAALDPASRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQSAGHKPIHEVRAVTATTSPMGQSGAPMSSNQVKYYELLARYYVLKRQHMLAAHALLRLAERRSIDGVPTLEQRCQYLSNAVLQAKNATNNDGLVGSTRSSIDSGFLDLLEGKLAVLRFQIKIKEELEAMASRSEVLHSTSDSAQNGVAPEGSSTADANFVNATREKAKELSSDVKSITQLYNEYAVPFELWEICLEMLYFASYSGDSDSSIVRETWARLIDQAISRGGIAEACSVLKRVGPRIYPGDGAILPLDIICLLLEKAALERLNSGVEIVGDEDVARALVSACKGAAEPVLNAYDQLLSNGAILPSPNLRLRMLRSVLVVLREWTMSAYSQRMGTSAVGSSLILGGGFSWERTVDSQGIRDKITSAANRYMTEVRRLALPQNQTEVVYRGFKELEESLISPSFDRF* 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00147 1484 Gene3D - 531 883 - -
Rops2g00147 1484 MobiDBLite consensus disorder prediction 304 321 - -
Rops2g00147 1484 Gene3D - 894 1054 IPR042533 -
Rops2g00147 1484 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 12 1477 IPR004870 GO:0005643|GO:0006913|GO:0017056
Rops2g00147 1484 Gene3D Nucleoporin, helical domain, central subdomain 1057 1154 IPR042537 -
Rops2g00147 1484 Pfam Nup133 N terminal like 54 543 IPR014908 -
Rops2g00147 1484 MobiDBLite consensus disorder prediction 434 464 - -
Rops2g00147 1484 FunFam Nuclear pore complex protein NUP155 1057 1154 - -
Rops2g00147 1484 FunFam Nuclear pore complex protein NUP155 894 1054 - -
Rops2g00147 1484 Gene3D - 1180 1419 IPR042538 -
Rops2g00147 1484 MobiDBLite consensus disorder prediction 302 321 - -
Rops2g00147 1484 MobiDBLite consensus disorder prediction 435 464 - -
Rops2g00147 1484 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 873 1292 IPR007187 -
Rops2g00147 1484 FunFam Nuclear pore complex protein NUP155 1180 1416 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00147 2 2162373 2173730 Rops2g00147 2 2162373 2173730 ECH