Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00143 ATGTCATTACCGAATTTCGCTTCTCAGCCCCACGCGCCGCTCCTTCGTTCCCGCCGCGTGGGCTCCGATGGCGGCCGCGCTCCAATCCTGGCTCTCCTGCTCGGCCGCCGCGGCCCTTCCATGATGGTCCGAGAGACGGCGGCGCGTGAGCTGGAGGAGCGGCGTGCGGATTGGGGTTACTCGAAGCCGGTGGTGGTGCTTGACATGGCGTGGAACATGGCCTTTGTGGTGGTTTCTGTGGTTATGTTGGGTTGTACTTTGGAAGAGTTACCGAATACTCCGATCCGGGTGTGGATCTGCGGTTATGCTGTGCAGTGCCTTGTCCACGTCGTGCTGGTGTGGCTTGAGTATAAAAGGAGGAATGGAAGCAACGGCGAAGAATCTGCTATCCTTGATGAGGACAATTTCAACGATAGTGAGGATGACGATGTTGAAGTTGGAAGCTCCGGGAATTCCTCTCTCTCTGGATTCACGAGACGATGTGCATCATTGAATACCATGGTTTCATTGCTTTGGTGGATGGTGGGCTTTTACTGGGTTGTCTCTGGTGGTGATATTCTTCTGCAAGATGCTCCGCGTTTGTACTGGTTGGCCGTTGTCTTTCTGGCATTTGATGTCTTCTTTGCCATCTTTTGCGTTGTTTTGGCATGCTTGATTGGTATTGCCCTCTGTTGTTGTTTGCCCTGTATAATTGGTATCCTTTATGCCGTTGCAGGACAGGATGGTGCATCAGAATCGGATCTCAGTATACTTCCAAAATACAGATTTCAAATGTCAAGCAATGAGGAGATACCTGGTGAAGGAACAGGTGGATCAATGGTTCCTATAGAAACCAGCAGTGGTTACGTGCCAAATGAACGAATACTTCTACCTGAGGATGCGGAATGCTGTATATGCATCTCTTCCTATGAAGATGGAGCAGAACTTCACGCTCTTCCCTGTAATCATCATTTCCATTCAACATGCATTGGGAAATGGTTAAAGATGAATGCAACTTGTCCGCTTTGCAAATACAATATTTTAAAGGGAAATGAACAGGTGTGA 1044 0.4923 MSLPNFASQPHAPLLRSRRVGSDGGRAPILALLLGRRGPSMMVRETAARELEERRADWGYSKPVVVLDMAWNMAFVVVSVVMLGCTLEELPNTPIRVWICGYAVQCLVHVVLVWLEYKRRNGSNGEESAILDEDNFNDSEDDDVEVGSSGNSSLSGFTRRCASLNTMVSLLWWMVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIGILYAVAGQDGASESDLSILPKYRFQMSSNEEIPGEGTGGSMVPIETSSGYVPNERILLPEDAECCICISSYEDGAELHALPCNHHFHSTCIGKWLKMNATCPLCKYNILKGNEQV* 348
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00143 347 CDD RING-H2_PA-TM-RING 295 337 - -
Rops2g00143 347 Pfam Ring finger domain 295 337 IPR001841 -
Rops2g00143 347 ProSiteProfiles Zinc finger RING-type profile. 296 337 IPR001841 -
Rops2g00143 347 SUPERFAMILY RING/U-box 285 341 - -
Rops2g00143 347 PANTHER TARGET OF ERK KINASE MPK-1 35 345 - -
Rops2g00143 347 FunFam E3 ubiquitin protein ligase RIE1 276 344 - -
Rops2g00143 347 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 345 IPR013083 -
Rops2g00143 347 MobiDBLite consensus disorder prediction 133 154 - -
Rops2g00143 347 SMART ring_2 296 336 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops2g00143 Rops-Chr2 2136922 2140707 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00143 8 346 C3H Transcription Factor Family AT1G68070 66.764 1.30e-167 469
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00143 2 2136922 2140707 Rops2g00143 2 2136922 2140707 ECH