Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00188 ATGAGTGCCTATGGTCTCTCAGGTTTGGCACACTTGTTTGGCGTTTTGGCCATCATTCTATTGCTTGTTTGGTTGTTGCATTACCGTGAGGGGATTGACTATGATTCGGACAACGGATTTCGGGTCTTCAATGTTCACCCTTTAATGATGTTCTTGGGGTTTATTTTCCTTGCTGGTGAAGCTATGATGGCATTCCAAACGGTACCAGGCCAAAGGAAAAACAGGAAGCTTGTTCATATGACACTACATTTGATTGCTATCATTTTTGGTATCGTTGGTTTGTGTGCCGTTTTCAAGTTCCATGATATGGCAAACATTGCGGACGTTTACAGCCTCCATTCATGGATCGGCATTGGCACCTTTTGCTTGTTTGGTTTGCAGTGGCTTTTTGGTTTCGTTACGTTTATGCTTCCAGGAGCACAAGGTCCAACAAGAGCTGCAGTGCTTCCATGGCACAGAGCTGGTGGCAGAGCACTGTTGCTCATGGCAATTTGTGCAGCAGAAACAGGATTGATGGAGAAGTCTATTTTCTTATCACTGAAGCCATATCAGGGAGAAACTAATTTGGTCAACTTCACGGCTCTAGCAATTCTCTTGTTTGGAGTTTTTGTGAATCTTTCTGTTAGTTTTGTTTAG 636 0.434 MSAYGLSGLAHLFGVLAIILLLVWLLHYREGIDYDSDNGFRVFNVHPLMMFLGFIFLAGEAMMAFQTVPGQRKNRKLVHMTLHLIAIIFGIVGLCAVFKFHDMANIADVYSLHSWIGIGTFCLFGLQWLFGFVTFMLPGAQGPTRAAVLPWHRAGGRALLLMAICAAETGLMEKSIFLSLKPYQGETNLVNFTALAILLFGVFVNLSVSFV* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00188 211 PANTHER CYTOCHROME B561-RELATED 8 209 IPR043205 GO:0016491
Rops1g00188 211 CDD Cyt_b561_ACYB-1_like 36 178 - -
Rops1g00188 211 SMART 561_7 45 171 IPR006593 -
Rops1g00188 211 ProSiteProfiles Cytochrome b561 domain profile. 9 209 IPR006593 -
Rops1g00188 211 Gene3D - 1 210 - -
Rops1g00188 211 Pfam Eukaryotic cytochrome b561 45 177 IPR006593 -
Rops1g00188 211 FunFam Probable transmembrane ascorbate ferrireductase 3 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00188 Rops-Chr1 5675976 5678999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00188 9 209 Chloroplast and Mitochondria Gene Families AT1G14730 54.229 1.61e-78 233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00188 1 5675976 5678999 Rops1g00188 1 5675976 5678999 ECH