Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00159 ATGTCGAACCCAGTCGACCATACCGATCAAAGAGTTGAAGCAATTCCTCACTCTACAGCTTCACCAAATTGGACTGCTCATGTTTCAGAAATAAGAACAGTTAAGGTTAGCAACATATCACTGGTTACTTCCAAGAAGGACATTGAAGAATTCTTTTCATTCTCAGGTGATATTCAATATATTGAGATGCAAAGGGAAACAGATCGCACCCAAATTGCTTATGTTACCTATAAGGATTCACAGGGAGCCGATACAGCAGTTCTCTTGACAGGTTCCAAGATAGCCGACCTATATGTCACTATCACACCTGTGGAGAAGTACCAACTTCCCCCTGAAGCTCTTCCCTCAAGTCCAACAAACCAAAGTGCTGATGCGGTTAAGAAGGCTGAAGATGTAATAAGCACCATGCTTGCCAAGGGTTTCATTTTAGGAAAGGATGCAATCAACAAGACAAAAGCCTTTGATGAACGTCATCATTTGACCTCAAATGCTTCTTCCACAGTTGCTTCCATCGATCATAAAATGGGTTTAAGTGATAAACTAAGCACTGGAACAGCCATTGTCAATGAAAAGGTGAGAGAGATGGATGAAAGGTATCAGCTTTCTGAAATGACAAAGTCTGCTATTGCTGTTGCTGAGCAAAAGGCGAGTAGTGCTGGATCTGCTATCATGAGCAATCCTTATGTATTAAGCGGAGCTTCATGGTTGTCAAGTGCCTTCACTGCTATTTCCAAGGCAGCAGGGGATGTCAGCACGATGACCAAGGAGAAGGTTGAACAAGCCGAGGTGGAAAAGAAGGAGATCATTTACAGTGAAAGGAAAGGGATGGTTGATGAATTTGCACAGATGCACTTTGAGGAGTCTTCAGATGCGGGCCCTGCAGTAGTTCCTGTTAATTCAGACAATGACAGTAGGCTGGGAATTTTATAA 930 0.428 MSNPVDHTDQRVEAIPHSTASPNWTAHVSEIRTVKVSNISLVTSKKDIEEFFSFSGDIQYIEMQRETDRTQIAYVTYKDSQGADTAVLLTGSKIADLYVTITPVEKYQLPPEALPSSPTNQSADAVKKAEDVISTMLAKGFILGKDAINKTKAFDERHHLTSNASSTVASIDHKMGLSDKLSTGTAIVNEKVREMDERYQLSEMTKSAIAVAEQKASSAGSAIMSNPYVLSGASWLSSAFTAISKAAGDVSTMTKEKVEQAEVEKKEIIYSERKGMVDEFAQMHFEESSDAGPAVVPVNSDNDSRLGIL* 310
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00159 309 MobiDBLite consensus disorder prediction 288 309 - -
Rops1g00159 309 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 95 IPR000504 GO:0003723
Rops1g00159 309 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 31 262 - -
Rops1g00159 309 Gene3D - 27 102 IPR012677 -
Rops1g00159 309 SMART rrm1_1 33 102 IPR000504 GO:0003723
Rops1g00159 309 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Rops1g00159 309 SUPERFAMILY RNA-binding domain, RBD 22 107 IPR035979 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops1g00159 Rops-Chr1 4828077 4831953 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00159 1 4828077 4831953 Rops1g00159 1 4828077 4831953 ECH