Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00147 ATGAAGAGATTTGTGCTCCTCGAGTGGAGGAATTTTGCTTCATCACGGACAATACTTACACGAAAGAAGAGCTGCACGTGGGAGGATCAGTCGTTGGTGTGGGCCCGTACATGGAAGCTTCAACGACGTAGAAGGGAACACTTGATGTGCATGCTATGTGACCACTTGCATGAGCTTGGGGAAACTACAACATCATGGGCCAAACAGCAGCGTGGGAAACACAGTCTTGGAAGCTGCAAAGTGATGGGAACATGGGTAAACTTTTGGGGCAAGTTGGGAACTTGGTTATATAACCTGACTAAATTGTCTTTCAGTACAGGAAAGCCAGAAGAGTTAGCAATAAGGATGGGCAAAACAATCGAGTTGTATGGATTCCCTTCTTCTGTGATTGTGTCTGATGTAAAGACATTTGTAGAGCAGTATACTGGTGAAGAAACTGTGTTTGCTATTAAGTTAAGACTAGGCAAAGGTCGGGTTCCAAGAGCATTTGCTATTATTCAATTCACGTCTGCAAAATATGCTGCCTCTATGATGTCCTTAGCTAACAACAGTTTGAAACCATTATGGTATCACAAGTCCTATCTAAAAATTCGGGAAATGGAAAGAGATATTGTGCCAAAGCCAAGAACCTCTTTGCATTGTTTGAATAATGTGAAACTGCATTTTGGCTGTCAGATCTCGAAGGAAAGATTCTCTGTTTTATGGAGAACGGTGAATGTTAGCGTAGAGTTTGGGATTGGAATGAGAAAGTGGCATTTCTTTCTGTCCTATAGAGACGTGAAATACAAACTTGAGCTTTCATATGAGAACATTTGGAAGATTGAGCTGCATCAACCACGAGGTGAAACCGCAAAGTATCTCCTGATTCAGTTACTTGGTGCTCCTCGGATTTTCGAGAATGATATTCCTACTTCAGTAAATGTATATGAAGATCCTTTGAAGAACTTCTTTAAAGATACCCCTGATGAGCAATGGATCCGAGCAATAGATTTCACTCCTCTCAGTTGTATTGGGCAGTCTTGTGCTTTATGTCTGGAGCTTCCTTATGGACAACATTTTCCAGATTTCAGGGAAAACTTCGCTTATTTTGAGGAAAGTGAGAGGCGATACACTTTAGAGTCAGGAACTTCTTTTTCTCTCAATTTGGGTCTTGTCCCCATTATTGCTCCTCCTCGAGGCATTGAAATACCATATGACATCTTGTTTAAAGTTAATTCATTGGTTCAGCATGGGTGTCTTTCAGGTCCTGCGCTTGATAGTGCCTTCTACCGTTTGGTTGATCCATGTAGAATGGGCCTTGAATTTGTTGAATATGCTTTAGAAAAAATGTACCATTCAAAGGATTTCTGTTATGATCCCAAAAATTGGCTGACTGATCAGTACAGAAGGTACCTTAATTCTAAGAAGCCTCCTCGGTCACCTGCAATATCCTTGGATACGGGGTTGGTATATGTGCGCAGGGTTCAGATTACTCCTTGCAAAGTATACTTTTGTGGTCCAGAGATTAATGTCTCAAATCGTGTTCTCCGCCATTTCCATGAACATATTGATAACTTTCTACGTGTTTCGTTTGTTGATGAGGAGTTGGATAAACTGTATTCCACAGATTTATCTTCACGTGCATCTGAGGGCAGGAAAACTCAGATATATGCAAGAATTCTTTCCGTCCTCGGAAATGGCATAGTTATTGGTGATAAGAAGTTTGAATTTCTAGCATTCTCATCAAGTCAGTTGCGGGAAAAGTCTCTCTGGATGTTTGCCCCTACAACAACTGGATGTACTGCTGCTTTCATCAGGGAGTGGATGGGGAATTTTCGCCAGATTAGAAATGTGGCTAAATATGCTGCTAGGCTGGGACAATCTTTTGGTTCTTCTACTGAAACTCTAAGCGTCAACAGGGATGAATTTGAAATTATTCCTGATGTGAAGGTTAGGAATGGTGGAACTGAATATGTCTTTTCTGATGGAATTGGGAAAATATCTCTTGAATTTTCCAGGAGAGTGGCTAAAAAATGTGGTCATAATTCCACTCCATCAGCCTTTCAGATTCGGTATGGCGGGTACAAAGGAGTTGTGGCTGTTGACCCAACATCATCTGTAAAGCTATCACTGAGGAAGAGCATGCACAAGTATGATTCTGATAACACAAAATTGGATGTTTTGGCATGTAGTAAGTTTCAGGCTTATTATCTGAATCGGCAGTTGATTACTCTCTTGTCCACTCTTGGTGTCAAGGACAATGTTTTTGAGAAAAAACAAAAAGAAGCTATTAATCAACTGAACACTATGCTAACAGATTCATTAAAGGCACAGGAGGCTTTGGACTTAATGTCTGCTGGGGAGATCACTAATGTTCTGAAGGAGTTGCTCATTTGTGGTTACAAGCCTAATGTTGAACCATTTCTTTCAATGATGCTGCAGACATTTAGGGCATCAAAACTATTGGAATTACGACAAAAAACTAGGATCTTTATTCCCAAAGGAAGAGCAATGATGGGATGTCTAGATGAAACTAGAACCCTAGAATATGGTCAAGTATTTGTTCAATATTCTAACAATAGGCTTGGGAATCTTTCTGATGATTCATCTTCATATGGTTCAGCAAAATCTTATGTAGTTGTGGGTAAGGTAGTGGTAGCAAAAAACCCCTGCTTGCATCCAGGTGACGTGCGTGTTTTGAAGGCTGTGAATGTGCCAGCTTTGCACCACATGGTGGATTGTGTTGTTTTTCCACAAAAAGGAGACAGACCTCATCCAAATGAATGTTCGGGAAGTGATCTGGATGGAGACATCTACTTTGTTTGTTGGGACCAGGATTTGATTCCATCTAGGATAGAACAACCAATGGATTATACTGCTGCCCCAAATACGGAATTGGATCATGATGTGATAATTGAGGAGGTTGAGGAGTATTTTACCAATTACATACTCAATGACAGTCTGGGAATAATTGCCAATGCACACACTGCCTTTGCAGATAAAGAACCTTTAAAAGCAATGGCTAAGCCATGTCTTGAGCTTGCAAGGCTATTTTCAATAGCTGTTGACTTTCCAAAAACTGGTGTCCCAGCTGTTATACCAGTTGATCTTTCTGTCAAAGAATATCCTGACTTCATGGAGAAGTCTAACAAACCCACCTATGAATCACATAATGTAATAGGAAAGCTTTTTAGAGAAGTGCAAGGAATTTCATCAAGTGCTGGCTCTATTACATTCTTCACACTGGAAGTGGCTAGAAAGTCATATGACCCTGACATGGAAGTTGATGGCTTTATGGATTATGTTGATGATGCTTTCTATCACAAAAGCAATTATGACTACAAGTTGGGAAATCTAATGGACTACTATGGGATCAAAACTGAAGCTGAAATTCTTAGTGGGAACATTATGAAAATGTCAAAATCTTTCACCAAAAGAAGGGAAGCTATTAACATGGCTGTAAAATCCCTAAGGAAAGAGGCTAGGACTTGGTTCAATGATAGCAGTAGTGGTGTGGATTCTGGGAGTGATGATGCATATGCAAAAGCTTCTGCTTGGTACCATGTTACTTATCATCCAAGTTACTGGGGTTGCTACAATGAAGGTATGAATAGGGACCATTATCTAAGCTTCCCATGGTGTGTTTACCATCTTCTTGTCCAAATCAAGAAGCAGAAGAGAGCTCTGTACAGATCCTTGGAACACAGTTTCAGAGATGGGTTGCATTTGAATTGA 3714 0.4041 MKRFVLLEWRNFASSRTILTRKKSCTWEDQSLVWARTWKLQRRRREHLMCMLCDHLHELGETTTSWAKQQRGKHSLGSCKVMGTWVNFWGKLGTWLYNLTKLSFSTGKPEELAIRMGKTIELYGFPSSVIVSDVKTFVEQYTGEETVFAIKLRLGKGRVPRAFAIIQFTSAKYAASMMSLANNSLKPLWYHKSYLKIREMERDIVPKPRTSLHCLNNVKLHFGCQISKERFSVLWRTVNVSVEFGIGMRKWHFFLSYRDVKYKLELSYENIWKIELHQPRGETAKYLLIQLLGAPRIFENDIPTSVNVYEDPLKNFFKDTPDEQWIRAIDFTPLSCIGQSCALCLELPYGQHFPDFRENFAYFEESERRYTLESGTSFSLNLGLVPIIAPPRGIEIPYDILFKVNSLVQHGCLSGPALDSAFYRLVDPCRMGLEFVEYALEKMYHSKDFCYDPKNWLTDQYRRYLNSKKPPRSPAISLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHEHIDNFLRVSFVDEELDKLYSTDLSSRASEGRKTQIYARILSVLGNGIVIGDKKFEFLAFSSSQLREKSLWMFAPTTTGCTAAFIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSVNRDEFEIIPDVKVRNGGTEYVFSDGIGKISLEFSRRVAKKCGHNSTPSAFQIRYGGYKGVVAVDPTSSVKLSLRKSMHKYDSDNTKLDVLACSKFQAYYLNRQLITLLSTLGVKDNVFEKKQKEAINQLNTMLTDSLKAQEALDLMSAGEITNVLKELLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPKGRAMMGCLDETRTLEYGQVFVQYSNNRLGNLSDDSSSYGSAKSYVVVGKVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGDRPHPNECSGSDLDGDIYFVCWDQDLIPSRIEQPMDYTAAPNTELDHDVIIEEVEEYFTNYILNDSLGIIANAHTAFADKEPLKAMAKPCLELARLFSIAVDFPKTGVPAVIPVDLSVKEYPDFMEKSNKPTYESHNVIGKLFREVQGISSSAGSITFFTLEVARKSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAEILSGNIMKMSKSFTKRREAINMAVKSLRKEARTWFNDSSSGVDSGSDDAYAKASAWYHVTYHPSYWGCYNEGMNRDHYLSFPWCVYHLLVQIKKQKRALYRSLEHSFRDGLHLN* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00147 1237 PANTHER RNA-DEPENDENT RNA POLYMERASE 117 1226 IPR007855 GO:0003968
Rops1g00147 1237 Pfam RNA dependent RNA polymerase 490 1060 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00147 Rops-Chr1 4344485 4369380 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00147 1 4344485 4369380 Rops1g00147 1 4344485 4369380 ECH