Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00111 ATGGTGGACGCTCTCTCGGTGATTCCGGCAGCCGTGCTCCGGAACCTCGCCGACAAACTCTACGAGAAGCGGAAAAATGCTGCTCTTGATATTGAGGGGATAGTGAAGCAGCTTGCTGTTGCTGGGGATCATGATAAGATAACTGCTGTGATCAATTTGTTGACTACGGAATTCACTTATTCTCCACAAGCAAATCACCGCAAGGGAGGGTTGATAAGCTTAGCTGCTGCTACTGTTGGGTTGACTGCTGAAGCTGCTCAGCATCTTGAGCAAATTGTGCCTCCTGTGTTAAACTCTTTCTCTGATCAAGATAGCAGGGTTCGTTATTATGCTTGTGAAGCACTATATAACATAGCTAAGGTTGTGAGAGGAGATTTTATTATATTCTTCAACCAGATCTTTGATGCTTTATGCAAGCTTTCTGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCATCTCTTAGATCGACTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCATTGTTGAGGGAGCGCATGAATGTATTAAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTGGGTTTTCTTCCAGATTTTCTTGATGGTTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCTGCTCTTTCTGAGTTTCTTCAAGAGATTAAGAACTCTCCATCTGTAGATTATGGTCGAATGGCTGAAATATTGGTACAGAGGGCTGGTTCTCCAGATGAATTTACTAGGTTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGCATATCAGATAAAGAAGAGAAAATTAGAGTGGTTGCCCGTGAAACCAATGAAGAGCTACGATCAATCAAGGCTGATCCAGCTGAAGCATTTGATGTAGGAGCAATCCTCTCCATTGCTAGGAGGCAACTATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACCCTTTTAAACAAACATCGTACTGAGGTTTTGACATACCTGAATGACATATTTGACACCCTACTCAAAGCACTTTCAGATCCATCTGACGAGGTTGTGCTTTTAGTTCTTGATGTTCATGCATGCATTGCAAAAGATCCTCAGCATTTCCGGCAGCTTGTTGTTTTCCTAGTGCACAATTTTCGGCTAGATAATTCACTTTTGGAGAAGCGTGGTGCTTTGATAATCCGTCGCCTTTGTGTGCTTTTGAATGCTGAAAGAGTCTACCGTGAACTTTCTACAATATTAGAAGGAGAATCCGATTTGGATTTTGCGGCGATTATGGTTCAGGCTTTGAATTTGATCTTACTCACATCATTGGAATTATCTGAGATTCGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCTGGGAAGGACTTGTATGTTTCTTTATATGCCTCTTGGTGTCATTCTCCAATGGCAATTATAAGTCTTTGCTTTTTAGCACAGACTTACCAACATGCAAGTGCTGTGATTCAATCTCTGGAAGAGGAGGATATAAATGTCAAGTTTTTGGTCCAACTGGATAAATTGATTCGCTTGCTGGAAACTCCAATCTTCGCTTATCTTAGATTGCAGCTTCTTGAATCTGGAAGATATATATGGTTATTCAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTTAAGATACTAAAAACTCGTTTAAAGGCTGTGCCGTCGTATTCTTTCAATGGTGAGCAATTGAAGAGAATGCCTTCAGGGGATCCCTACCAATTTCTTCATCATATGCCTGATGGATATCCGACCATTGAGGATGGTGAAGTAGCTGAAGATGGTGGGAGCTCACATAATGGAATAAATTTTGCTGCAAGGTTACAACAGTTTCAACAAATGCAGCACCAACATCGGATGCACAATAAAGCACGGAGAAAGTCACGCAATATTTCCACTTCATTACCAAAGGAGGCACAAAGAGAGGAAGAACCAAGGAAACCTCAGTCTATTGACCCTAATGTTCCTCCTTCAAGATCAAAGAAAGGTCCAGGACAACTATAA 2166 0.4118 MVDALSVIPAAVLRNLADKLYEKRKNAALDIEGIVKQLAVAGDHDKITAVINLLTTEFTYSPQANHRKGGLISLAAATVGLTAEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRSIKADPAEAFDVGAILSIARRQLSSEWEATRIEALHWISTLLNKHRTEVLTYLNDIFDTLLKALSDPSDEVVLLVLDVHACIAKDPQHFRQLVVFLVHNFRLDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFAAIMVQALNLILLTSLELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYQHASAVIQSLEEEDINVKFLVQLDKLIRLLETPIFAYLRLQLLESGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKRMPSGDPYQFLHHMPDGYPTIEDGEVAEDGGSSHNGINFAARLQQFQQMQHQHRMHNKARRKSRNISTSLPKEAQREEEPRKPQSIDPNVPPSRSKKGPGQL* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00111 721 FunFam protein VAC14 homolog 126 248 - -
Rops1g00111 721 MobiDBLite consensus disorder prediction 666 721 - -
Rops1g00111 721 FunFam protein VAC14 homolog isoform X1 249 410 - -
Rops1g00111 721 FunFam ARM repeat superfamily protein 6 125 - -
Rops1g00111 721 Gene3D - 252 479 IPR011989 -
Rops1g00111 721 PANTHER TAX1 BINDING PROTEIN-RELATED 7 683 IPR026825 GO:0006661|GO:0070772
Rops1g00111 721 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Rops1g00111 721 Gene3D - 1 251 IPR011989 -
Rops1g00111 721 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Rops1g00111 721 SUPERFAMILY ARM repeat 5 546 IPR016024 -
Rops1g00111 721 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00111 Rops-Chr1 3215665 3227967 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00111 1 3215665 3227967 Rops1g00111 1 3215665 3227967 ECH