Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00081 ATGGGTTCTGAAGGATCCAGCGTTGTCGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGATTCGGGGATGGAACTGTTAGCTATGGAATGGATGATGCTGACGATATATACATGCAGTCTTGGACTGGGACTATCATTGGTCCCCCTGGTACTGTTCATGAGGGACGTATCTACCAGTTGAAATTTTTTTGTGGCAAGGATTATCCAGACAATTCTCCATCTGTTAGATTCCAAACAAGGATTAACATGACTTGTGTCAATCAAGAAACTGGTGTGGTTGAGCCACATTTGTTTCCTATGCTTGCTAATTGGCAACGTGAGTGTACAATGGAAGACATTTTGATGCAGTTGAAGAAAGAAATGATGTCTCCACAAAACCGGAAGCTAACTCAGCCTCCTGAAGGCAATGAAGAAGCCAGGATTGACCAGAAGGGGTTGGTGGTGAGATGTTCTATTGTGTAG 480 0.4354 MGSEGSSVVVPRNFRLLEELERGEKGFGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKFFCGKDYPDNSPSVRFQTRINMTCVNQETGVVEPHLFPMLANWQRECTMEDILMQLKKEMMSPQNRKLTQPPEGNEEARIDQKGLVVRCSIV* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00081 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 44 135 - -
Rops1g00081 159 SUPERFAMILY UBC-like 9 142 IPR016135 -
Rops1g00081 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Rops1g00081 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Rops1g00081 159 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 2 144 - -
Rops1g00081 159 SMART ubc_7 14 158 - -
Rops1g00081 159 Pfam Ubiquitin-conjugating enzyme 41 134 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00081 Rops-Chr1 2401288 2409673 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00081 1 2401288 2409673 Rops1g00081 1 2401288 2409673 ECH