Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00078 ATGAATATCCAACTCGGCAAACATGGCAGTGACACTGGAGTTTATGATACTGAAGGAAGGTTCGTTCCTTCAAAATTTGAAGAAATTTTCATCAAACATGCACATACACATCCAAATGCTTTAACATATGATGAGCTGAAGGAGATGATTAAGGCGATCAAAGAGCCTAAAGATCTCAAAGGAAGGATTGGTAGCTTGGTTGAATGGAAAGTTCTTTATAAACTTGCCAAAGACAAGAATGGTTTACTACAGAAAGATACAATCCAAGTGCGCCAACTAGCTAAGGAGATGAAGGAGTTACGTAGAAGGGCTGAGGAGCATATCAACCAAGAGAAGATGGCCAAAGCCAAAGAAAGAGAGTGGGGAAGAAGTTTTTCACCTAGAAATGACAAGGCCAGTCTGGGTAATAGGCAGGATAAGGGTAGAGGGTACACGGAGGCTCAGAACCGAGGTCAGGAAACTTAG 465 0.4194 MNIQLGKHGSDTGVYDTEGRFVPSKFEEIFIKHAHTHPNALTYDELKEMIKAIKEPKDLKGRIGSLVEWKVLYKLAKDKNGLLQKDTIQVRQLAKEMKELRRRAEEHINQEKMAKAKEREWGRSFSPRNDKASLGNRQDKGRGYTEAQNRGQET* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00078 154 Coils Coil 83 117 - -
Rops1g00078 154 PANTHER PEROXYGENASE 3-RELATED 2 90 IPR007736 -
Rops1g00078 154 MobiDBLite consensus disorder prediction 104 154 - -
Rops1g00078 154 Pfam Caleosin related protein 2 89 IPR007736 -
Rops1g00078 154 MobiDBLite consensus disorder prediction 104 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00078 Rops-Chr1 2316948 2323876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00078 2 90 Acyl Lipid Metabolism Gene Families AT1G70670 66.292 1.58e-37 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00078 1 2316948 2323876 Rops1g00078 1 2316948 2323876 ECH