Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03718 ATGGGTTCATTCCAGACACCAATTGGAATGAGAAGCTCCACATTGCTAGAAACTTCATGTGGATTCCTGTTACAGGAACTGCAGATTATATGGGATGAAGTTGGAGAAGATAAATTTGAAAGGGAGAAGGTTCTGCTGGATTTGGAGCAAGAGTGCCTAGAGGTTTACAGAAGAAAAGTTGACAGAGCAAATATATCTAGAGCTCGTTTGCATCAGGAATTGGCCGAGGCTGAGGCTGAATTTACTCACCTTCTTCTGTCCCTTGGTGAAAGATCTCTACCAGGACGGCCAGAAAAACGGGCGGGTACACTAAAAGAGCAGCTAGATTCAATCACTCCAGCACTCCAGGAGATGCGCTTGAGGAAAGAAGAGAGGTTAAACCAATTCAGATCTGTGCAAGGGCAAATTCAAAAAATTTCTGCAGAAATTGCAGGTAACTCAGACAGTGCACCCTCCTCAATCATTGAAGTAAACGAGAATGATCTTTCACTGAAAAGACTTGAGGAGTATCAGAATGAGTTGCAAAGGCTCTACAATGAGAAGAATGAAAGACTCCAACAAGTGGAGAAATACATAGACATAATACACAGCTTGTCCACAATCTTGGGAAAGGATTCCTCAGCGATCATCACGGAAGTTCACCCAAGCTTGAATGATTTGTGTGGAATAACAAAAAATATAAGTGACACTATCCTGGATAAACTCAATATCACAGTGGAGTCCCTTTTTGAAGAAAAACAAAATCGGCTGGACAAGCTTCACCATTTAGGCAAAGCACTGTTAAATCTATGGAATCTTATGGATACACCATACAGTGAACGACAATCTTTTTCCCATGTAATCAATTTGTTGTCAGTCTCATCGGCGGAAGTATCAGATCCAGGAAGTCTTACTCTAGAAATAGTCCAGCAGACTGAAGCTGAAGTAAAGAGACTGGATCAACTAAAAGCAAGCAAGATGAAGGAGCTATTCCAGAAGAAGCAGGAGGAATTGGAGTTGATATGCAAAAAATCACACGTGGAGATTCCTTCACGAACAGAGATGAACAATATAATGAGCCTCATAAATTCAGGGGAGATTGACCATTCCGATCTCCTCATGAGCATGGATGAACAGATATCAAGAGCAAAAGAAGAAGCTTCTAGCAGGAAAGCTATAATGGAGAAAGTGGAGAAGTGGATGTTAGCATGTGATGAGGAACGATGGCTAGAAGAATATAGCACGGATGAGAACCGATACTCAGTCAGTAGAGGAGCTCACAAAAACTTGAGACGTGCTGAACGTGCCCGTATAATGGTCAGCAGAATGCCAGCTTTGGTAGATTTGCTAATAAAAATGACTAGGAGTTGGGAAGAAGAAAGGAAAAAGGTTTTCTTGTATGATCAGGTACCTCTTATGGAAATACTGGAAGAATATAACATATTAAGGCGAGAAAAGGAGGAGGATAAGAAAAGACAGCAGTCATGGGAAAAGAAGAAGGTTCAGAGCCAAGTAGTTGTTGACCGAGATAATACATATGCGTCAAGACCCACCAGCAGCAGTAGACGTCTTCCAAATAGAAGCTTCAATGGAGGTCTAGACACTGCTGTGCCCCTGAACAGAAGGCTTTCTATGGGTATCCAACAACTGGGATCAAACAGCATCAATTCAGGAAATCAAGGAATATCCTTCTTTAAGGATGGAAGGAAGGTACAAAGAAAAAAGATTTTTGGTGAACCTGCCTTTGCTTCTCTTACAAGAGACGAGGCATCATCTGCGGTGTCAACACATTCTGGACCATTTTCTCCTTAA 1791 0.4171 MGSFQTPIGMRSSTLLETSCGFLLQELQIIWDEVGEDKFEREKVLLDLEQECLEVYRRKVDRANISRARLHQELAEAEAEFTHLLLSLGERSLPGRPEKRAGTLKEQLDSITPALQEMRLRKEERLNQFRSVQGQIQKISAEIAGNSDSAPSSIIEVNENDLSLKRLEEYQNELQRLYNEKNERLQQVEKYIDIIHSLSTILGKDSSAIITEVHPSLNDLCGITKNISDTILDKLNITVESLFEEKQNRLDKLHHLGKALLNLWNLMDTPYSERQSFSHVINLLSVSSAEVSDPGSLTLEIVQQTEAEVKRLDQLKASKMKELFQKKQEELELICKKSHVEIPSRTEMNNIMSLINSGEIDHSDLLMSMDEQISRAKEEASSRKAIMEKVEKWMLACDEERWLEEYSTDENRYSVSRGAHKNLRRAERARIMVSRMPALVDLLIKMTRSWEEERKKVFLYDQVPLMEILEEYNILRREKEEDKKRQQSWEKKKVQSQVVVDRDNTYASRPTSSSRRLPNRSFNGGLDTAVPLNRRLSMGIQQLGSNSINSGNQGISFFKDGRKVQRKKIFGEPAFASLTRDEASSAVSTHSGPFSP* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03718 596 Coils Coil 302 322 - -
Rops11g03718 596 MobiDBLite consensus disorder prediction 500 525 - -
Rops11g03718 596 SUPERFAMILY Methyl-accepting chemotaxis protein (MCP) signaling domain 102 315 - -
Rops11g03718 596 Gene3D - 373 508 - -
Rops11g03718 596 Coils Coil 160 191 - -
Rops11g03718 596 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 521 - -
Rops11g03718 596 MobiDBLite consensus disorder prediction 500 521 - -
Rops11g03718 596 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 16 561 IPR007145 GO:0000226|GO:0008017
Rops11g03718 596 Coils Coil 53 80 - -
Rops11g03718 596 Coils Coil 465 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03718 Rops-Chr11 70850250 70858093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03718 12 517 EF-hand Containing Proteins AT5G62250 39.494 3.26e-100 313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03718 11 70850250 70858093 Rops11g03718 11 70850250 70858093 ECH