Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2453 ATGGTGTCTTTGGTTTCCCAAGACAACAACCTTGTTGCATTGGTTTCTCGTACAGGCAGAGAGTTACAACGCTACAGAAAAGGTCGTCGCCAAGTCGTGGGATGCATACCCTACAGATATAAAATCGTTGATCAAACTTCGTTGGAGGGACCAGAAGATTTAGAAGTTCTGGTTATCACTTCTCAGAAAGGCAAAGGGATGCTATTTCCTAAGGGAGGTTGGGAATTGGACGAATCCAAAAAGGAGGCAGCTTTGAGAGAAACCATAGAGGAAGCAGGGGTTCGAGGCACTGTTGAGGGGAAATTGGGTAAGTGGAGTTTCAAGAGCAAGACTCATGATACATTTTACGAGGGCTACATGTTCCCTCTACTTGTCCAAGAGCAATTGGAGTTCTGGCCAGAACAGAATTTTCGTCAAAGAATATGGATGAGCGTTTCTGATGCAAGGGAAGTTTGTCAACACTGGTGGATGAAAGAAGCTCTAGAGAGACTAGTAAACCGTCTCATGGCTCGGAAACTTGGTCCTCTCAGACAAATAGTAGGTTCTATACACTGCATAGGAGATGCCAATTCTGACTTGTAA 582 0.445 MVSLVSQDNNLVALVSRTGRELQRYRKGRRQVVGCIPYRYKIVDQTSLEGPEDLEVLVITSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGTVEGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLEFWPEQNFRQRIWMSVSDAREVCQHWWMKEALERLVNRLMARKLGPLRQIVGSIHCIGDANSDL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2453 193 CDD Nudix_Hydrolase_9 31 158 - -
Pvu8g2453 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 9 188 - -
Pvu8g2453 193 ProSitePatterns Nudix box signature. 72 93 IPR020084 GO:0016787
Pvu8g2453 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 168 - -
Pvu8g2453 193 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 9 188 - -
Pvu8g2453 193 SUPERFAMILY Nudix 24 168 IPR015797 -
Pvu8g2453 193 Pfam NUDIX domain 55 163 IPR000086 -
Pvu8g2453 193 ProSiteProfiles Nudix hydrolase domain profile. 28 165 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2453 Pvu-Chr8 55123369 55124889 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2453 8 55123369 55124889 Pvu8g2453 8 55123369 55124889 ECH
Pvu1g2375 1 49091986 49093856 Pvu8g2453 8 55123369 55124889 PCT