Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2452 ATGCATATACGTGCCATAAGCATTCAAAGCCATATTAGAGTTAACTTACGTCAACATCTCCGAAAAATGAAAATGACCAAAAGGGGCATCTCACGCAGACTCATCACAGTGGGTGTGTTTTTCTGCATGACTTTGTTGTTCCCTGAGTTTTCTGAGTCTTCGAGCTCGAGTGCGGTTCTGTACAGCGGGTGCACGCAGCAACGGTACACCCCAAACTCGCCGTACCAGATGAACCTTGACTCGCTATTCTCCTCGCTGGTGAACTCGGCGACGTTCTCGTCTTATAACAACTTCACGATCGTGGGGTCCACGCAGCAGGACGCGGTGTCCGGCCTCTACCAGTGCCGCGGCGACCTCGCCATGCCGGACTGCGCCGCCTGCGTGGCGCGCGCTGTCACCCGCGCCGGCGATATCTGTCGCGGGACGTGCGGCGGCTCGGTGCAGCTCGACGGCTGCTTCGTGAAGTACGACAACGAGACGTTCCTCGGCGCACAGGACAAGACGGTTGTGCTGAAGAAGTGCGGGCCCTCCGTGGGGTACAACCCCGACGCCATGGGGAGCCGCGACGCGTTGCTTGCAGGGCTCACTGCCGCCGGAGGGAACTTCAGGGTGGGCGGCTCCGGCGGAGTGCGAGGCATGGCGCAGTGCAGCGGCGACCTGAGCTACGGCGAGTGCCAGGACTGCGTGGCGGAGGCCATCTCGCGGCTGAAGGGCGACTGCGGCACGGCGGATTACGGGGACATGTTCTTGGGGAAGTGTTATGCGCGGTACTCCACCGGTGGGGCCCACGATAATTCCAAGGCCCACGGGGAATCAAGTCATGGAGGTGTAAGGACATTTGCTATAATTATTGGATCATTAGCAGGAGCAGCTATACTTATTATTTTCCTTGCTTTCATGACCAAAATTTGTGGGAGACAGGGTAAATAA 930 0.5796 MHIRAISIQSHIRVNLRQHLRKMKMTKRGISRRLITVGVFFCMTLLFPEFSESSSSSAVLYSGCTQQRYTPNSPYQMNLDSLFSSLVNSATFSSYNNFTIVGSTQQDAVSGLYQCRGDLAMPDCAACVARAVTRAGDICRGTCGGSVQLDGCFVKYDNETFLGAQDKTVVLKKCGPSVGYNPDAMGSRDALLAGLTAAGGNFRVGGSGGVRGMAQCSGDLSYGECQDCVAEAISRLKGDCGTADYGDMFLGKCYARYSTGGAHDNSKAHGESSHGGVRTFAIIIGSLAGAAILIIFLAFMTKICGRQGK* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2452 309 Gene3D - 185 260 IPR038408 -
Pvu8g2452 309 Gene3D - 55 161 IPR038408 -
Pvu8g2452 309 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 36 306 - -
Pvu8g2452 309 ProSiteProfiles Gnk2-homologous domain profile. 57 161 IPR002902 -
Pvu8g2452 309 ProSiteProfiles Gnk2-homologous domain profile. 162 262 IPR002902 -
Pvu8g2452 309 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 36 306 - -
Pvu8g2452 309 Pfam Salt stress response/antifungal 64 158 IPR002902 -
Pvu8g2452 309 Pfam Salt stress response/antifungal 207 259 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2452 Pvu-Chr8 55117491 55119451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2452 100 298 Receptor kinase-like Gene Family AT1G70530 27.778 3.71e-14 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2452 8 55117491 55119451 Pvu8g2452 8 55117491 55119451 ECH
Pvu1g2376 1 49099481 49101449 Pvu8g2452 8 55117491 55119451 PCT