Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1498 ATGGATCCAAACACCGTCATGAGCGGCTACGACTTTGATGAGTGGGATCTCAATGGACACTACACCGACCTCGTCACTGATCCTTTTTCCTTTCAGTCCGATGTGGGCCCACCTGGGTTTTTTCCGAACACAATCCTAGACTCCGACCCGCTTGTTTCATCCTCCTCCGCCTCCGCCGCTGTGGCGGCTACGGTTGAGGAAGACACTGACTTTTCAGAAACCTTCAAGTTCATAAGTCAAATTCTCATGGAAGAGAACTTTGAACAGAAACCGTGCATGTGCTATGACCCTTTGACTCTGCAACACACCGAGAAATCCTTCTATGATGCTTTGGAATTGGAACCGCCACTGCCTCTTTCCCCGAATCAGCACCCGCTTGAGAGCCCCGATGGTAATTCTTCCAATTCCACTACTGATTCAGCCAATTCTCACGACTTTAAGCCTTCTTCGCCCAATACACCTGTTTCTGGCGGTGGCGATGCTTTGCATTCCTCTACCCACGCGCCCTCTTTCTTTGTTCCTCCGTCTGCTTTGACTAAAATCAACGAGGGAACCCTGGATTTGGATTCTTCTGTGAGCAAGCTCTTGGCTGAAAATATTTTCAGCGATGCAGAATCTATGTTGCAGTTTAGGAGAGGGTTGGAGGAGGCTAGTAAGTTTCTTCCTCAGAGAGCTCAGCTTTTCACTGGGTTCGAGAGCACCACGGTTTCTGCGGAACCAAAGGTAGGAGGGGACTTAACTGTGAAGCGGGAGAATTTAATTGGGGAGAAGAGTAGAAAGAATCACGCGCGCCAAGATGAAGAAGAAGGAAGAAGCAACAAACACTCCGAGGTTTGTGTTGATGAGGAGAATGAAATATCTGAAATATTTGATAAGGTGTTGCTTAGTGTTGAAAATGTTCCACTGTGTGTTGAGAAGAATGTATCTGTGGCAGTGGGAGATAGTAACGCAAAGCTGAGAGATCAACCGGTTGATGGAGGGAAGGTTCGTTCCAAGAGGCAAGGGAAGAAGAAGGAAACAGTGGATTTGAGGACCCTTTTGGTTCTGTGTGCGCAAGCTGTGTCTGCCAGTAACAACAGGACTGCTAATGAACTATTGAAGCAGATTAGGCAGCATTCTTCTGCCTTGGGTGATGCCTCACAAAGGTTGGCTCATTATGTGGCCAATGCTTTGGAGGCTCGCTTGGTTGGTGCTGGAACTGGCACACAGATATTTTATATGAGCCACAAGAAATTCACTACTACTGATTACCTGAAAGCTTACCAAGTTTTCATATCTGCCTGCCCTTTCAAGAAATTTGCACATTTCTTTGCAAATAAAATGATTATTAAAACAGCAGAAAAGGCAGAAACTCTTCATATTATTGACTTTGGTATCTTGTATGGTTTTCAGTGGCCAATTCTTATCAAGTTTTTATCAAGTAGAGTTGGAGGGCCTCCCAAGCTGCGCATCACAGGAATAGAGTATCCCCAACCCGGCTTTCGCCCATCTGACAGAATCGAGGAGACTGGTCGTCGTCTAGCTAAGTATTGCAAGCGATTCAATGTTCCCTTTGAGTACAAGGCGATACCATCTAGAAACTGGGAAACCATTCAAATTGAAGACCTTAAGATTGAGAGCAACGAGGTGCTTGCTGTGAACTGTCTGGTGAGGTTTAAGAATTTGCTTGATGAATCAATTGAAGTGAGCAGTCCCAAAAATGCTGTTCTGAATTTAATCAGGAAGATGAATCCGCATATTTTTGTTGACGCCGTGGTAAATGGATCTTATAATGCCCCTTTCTTTGTCACGCGCTTCAAGGAGGCACTGTTCCATTATTCTTCAATTTATGATATGTTTGATACTCTCATATCCCGTGAAAATGAATGGAGGTTGATGCTTGAGAGAGAATTTTTTGGTCGGGAGATCATGAATGTTGTAGCATGTGAAGCTCTTGAGAGGGTTGAGAGGCCAGAGACATACAAACAATGGCAGGTTAGGAATACTAGAGCTGGTTTTAGGCAGCTCCCACTGGACAAGGAGTTAATGGCCAAATTTAGAGGCAAGTTAAGGGAATGGTACCACAAGGATTTTGTCTTTGATGAAGACGGCGGCTGGATGCTTCAAGGTTGGAAGGGTCGCATTTTGTATGCTTCAAGTTGTTGGGTGCCAGCATAA 2157 0.4516 MDPNTVMSGYDFDEWDLNGHYTDLVTDPFSFQSDVGPPGFFPNTILDSDPLVSSSSASAAVAATVEEDTDFSETFKFISQILMEENFEQKPCMCYDPLTLQHTEKSFYDALELEPPLPLSPNQHPLESPDGNSSNSTTDSANSHDFKPSSPNTPVSGGGDALHSSTHAPSFFVPPSALTKINEGTLDLDSSVSKLLAENIFSDAESMLQFRRGLEEASKFLPQRAQLFTGFESTTVSAEPKVGGDLTVKRENLIGEKSRKNHARQDEEEGRSNKHSEVCVDEENEISEIFDKVLLSVENVPLCVEKNVSVAVGDSNAKLRDQPVDGGKVRSKRQGKKKETVDLRTLLVLCAQAVSASNNRTANELLKQIRQHSSALGDASQRLAHYVANALEARLVGAGTGTQIFYMSHKKFTTTDYLKAYQVFISACPFKKFAHFFANKMIIKTAEKAETLHIIDFGILYGFQWPILIKFLSSRVGGPPKLRITGIEYPQPGFRPSDRIEETGRRLAKYCKRFNVPFEYKAIPSRNWETIQIEDLKIESNEVLAVNCLVRFKNLLDESIEVSSPKNAVLNLIRKMNPHIFVDAVVNGSYNAPFFVTRFKEALFHYSSIYDMFDTLISRENEWRLMLEREFFGREIMNVVACEALERVERPETYKQWQVRNTRAGFRQLPLDKELMAKFRGKLREWYHKDFVFDEDGGWMLQGWKGRILYASSCWVPA* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1498 718 MobiDBLite consensus disorder prediction 114 168 - -
Pvu5g1498 718 MobiDBLite consensus disorder prediction 125 160 - -
Pvu5g1498 718 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 717 IPR005202 -
Pvu5g1498 718 ProSiteProfiles GRAS family profile. 334 716 IPR005202 -
Pvu5g1498 718 Pfam GRAS domain family 343 715 IPR005202 -
Pvu5g1498 718 MobiDBLite consensus disorder prediction 250 276 - -
Pvu5g1498 718 PANTHER SCARECROW-LIKE PROTEIN 34 45 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1498 Pvu-Chr5 37361147 37363303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1498 18 718 GRAS Transcription Factor Family AT1G07530 47.919 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu5g1498 GRAS 3.3e-113 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1498 5 37361147 37363303 Pvu11g0649 11 5479282 5481988 PCT
Pvu11g0648 11 5473805 5475178 Pvu5g1498 5 37361147 37363303 PCT