Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0991 ATGTCCAACACTCTGCACCAACACCAACAAAATCCCACTCTCGAATCAAAACGTCTTGATCCGGGTTCTCAGGTTTCCCGTCCCGGCCACCGGAGATCGGTATCAGCCGGAGCTCCGTTAATCTACTCTGGCTGCTCCTCTCTGATTCCGACCGGGAACATTTGTCCTTCAGGAAAGATCCTCAAACCGCTTCTGCCCTCCCGGGGACCCAACCGGACAGACGTGCTTGGCTCCGGCACAGTGAACTATGGTCGTGGAAGCATAATGCGTGGTGGCTCCGGCACCTATCCCGTGCCCGTGGCTGTGCCCGCAGCCGCGTCCCCGCTCACAGTGAAGCGGGCGCTCGGCGGGTCCGATCCCGAGGAGGTGAAGAGGGTAGGGAACGAGCTGTACAGAAGCGGGAACTTTGCGGAGGCTTTGGCATTGTACGATCGCGCCGTGGCCATCTCGCCTGGGAACGCGGCGTGCCGGAGCAACCGCGCTGCGGCGCTCACGGCGCTGGGGAGGCTTGGCGAGGCCGCCAGAGAGTGCCACGAGGCTGTGAAATTGGACCCTGCTTATGCTAGAGCTCACAAGAGGCTTGCCTCTCTTTATGTAAGGTTTGGGCAGGTTGAGAATTCGCGGCGCCATTTATGTCTGGCAGGGATTCAAGAGGATCAGTCCGAGGAGCAGAAGCTGTTGTTGTTGGAGAAGCATGTGAATCGATGCGCAGATTCCCGGAAATTTGGTGATTGGAAGAGGGTGCTTAGGGAATCAGAGGCTGCCATTGCCGTTGGAGCAGATTTTTCCCCGCAGATTTTCGCTTGCAAGGCAGAAGCTTATTTAAAACTGCATCAACTTGAGGATGCTGAATCCAGTCTCTTGAACATTCCGAAGTTTGAAGGCTTTCCTGCAGCATGTTCTCAAACCAAGTTCTTTGGTATGGTTGGTGAAGCCTATGTTCCTTTTGTGTCTGCTCAGGTTGAGATGGCCTTGGGGAGGTTTGAGAATGCTGTTGTGGCAGCTGAAAAGGCTAGCACGTTGGATTACAATAATGTTGAAGTTGGTCGGATTGTAAATGTTGTGAAAATGGTGGCAAGAGCTCGTTCAAGGGGCAATGATCTTTTCAGCTCTGGCAAGTTTTCTGAAGCTTGTTCTGCTTATGGTGAGGGCCTCAAGTATGACAACTCCAACTATGTTCTATATTGCAATAGGGCAATTTGTTGGTCTAAACGTGGACTGTGGGAACAATCGGTTCAAGACTGCAACCAAGCTCTTAACATTCAACCAAATTACACCAAGGCTCTTTTCCGTAGGGCTGCATCAAATTCAAAGCTTGAAAGATGGGCAGATGTTATTAAAGATTATGAAGCCTTAAACCGCGAGCTCCCTAATGACAAAGAAGTTGCTGAGTCTCTTCGTCGGGCTCAGTTAGCATTAGAAAAATCTCGGCTAGTGATATATGGTACCAAGTTTGGAATTGAAGTTGAAGAAATCTCAGCATTAGACAAATTTAAAGCTGCAATTGCTTCTGCTGCTGTTTTGGTAGTTTATTTCAAAGAGGCATCAAACGAACTATGTGAGGAAATATCTCCATTTATAAACACCTTGTGTGTTAGATATCCATCTGTTAAATTTATTAAGGTGGACGCTGAGGAGTGTATTGCAATAGCAAAAAGTGAGATCATAAGAAGTGTTCCAACTTTTAAAATTTATAAAAATGGTGAAAAGGTGAAGGAGATGATCCAGCCAACACATCAGTTATTAGAGGACTGGATAAGAAGAAGCAGAAGTCTGTAG 1779 0.4857 MSNTLHQHQQNPTLESKRLDPGSQVSRPGHRRSVSAGAPLIYSGCSSLIPTGNICPSGKILKPLLPSRGPNRTDVLGSGTVNYGRGSIMRGGSGTYPVPVAVPAAASPLTVKRALGGSDPEEVKRVGNELYRSGNFAEALALYDRAVAISPGNAACRSNRAAALTALGRLGEAARECHEAVKLDPAYARAHKRLASLYVRFGQVENSRRHLCLAGIQEDQSEEQKLLLLEKHVNRCADSRKFGDWKRVLRESEAAIAVGADFSPQIFACKAEAYLKLHQLEDAESSLLNIPKFEGFPAACSQTKFFGMVGEAYVPFVSAQVEMALGRFENAVVAAEKASTLDYNNVEVGRIVNVVKMVARARSRGNDLFSSGKFSEACSAYGEGLKYDNSNYVLYCNRAICWSKRGLWEQSVQDCNQALNIQPNYTKALFRRAASNSKLERWADVIKDYEALNRELPNDKEVAESLRRAQLALEKSRLVIYGTKFGIEVEEISALDKFKAAIASAAVLVVYFKEASNELCEEISPFINTLCVRYPSVKFIKVDAEECIAIAKSEIIRSVPTFKIYKNGEKVKEMIQPTHQLLEDWIRRSRSL* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0991 592 Gene3D Tetratricopeptide repeat domain 118 478 IPR011990 GO:0005515
Pvu5g0991 592 MobiDBLite consensus disorder prediction 1 20 - -
Pvu5g0991 592 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 3 587 IPR044534 -
Pvu5g0991 592 Gene3D Glutaredoxin 481 592 - -
Pvu5g0991 592 Pfam Thioredoxin 496 586 IPR013766 -
Pvu5g0991 592 SMART tpr_5 154 187 IPR019734 GO:0005515
Pvu5g0991 592 SMART tpr_5 120 153 IPR019734 GO:0005515
Pvu5g0991 592 SMART tpr_5 312 345 IPR019734 GO:0005515
Pvu5g0991 592 SMART tpr_5 358 391 IPR019734 GO:0005515
Pvu5g0991 592 SMART tpr_5 264 297 IPR019734 GO:0005515
Pvu5g0991 592 SMART tpr_5 392 425 IPR019734 GO:0005515
Pvu5g0991 592 SMART tpr_5 426 459 IPR019734 GO:0005515
Pvu5g0991 592 Coils Coil 449 469 - -
Pvu5g0991 592 ProSiteProfiles TPR repeat profile. 120 153 IPR019734 GO:0005515
Pvu5g0991 592 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL4 3 587 - -
Pvu5g0991 592 SUPERFAMILY TPR-like 119 347 IPR011990 GO:0005515
Pvu5g0991 592 CDD TRX_family 498 586 - -
Pvu5g0991 592 Pfam Tetratricopeptide repeat 130 194 - -
Pvu5g0991 592 MobiDBLite consensus disorder prediction 1 34 - -
Pvu5g0991 592 SUPERFAMILY Thioredoxin-like 401 588 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0991 Pvu-Chr5 28599039 28602473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0991 132 205 Glycosyltransferase AT3G04240 33.784 1.80e-06 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0991 5 28599039 28602473 Pvu5g0991 5 28599039 28602473 ECH
Pvu11g1659 11 42015306 42019470 Pvu5g0991 5 28599039 28602473 PCT