Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0889 ATGATGTTATCAGCTTCGATGTCTGCTCTAACGAGGAGTTCGCTGGAGGAGATGCTTGAGTCACTTCGCAAGAGAGACGAGGAAGAGAGGCCGAAGGACTTGCCGCCGGCATTGCCGTCACGGCCGCAGTCGAGGGCGCGGATGCCGCCGGCGAGGAGGTCGTTGCCTAATAGCTTCAAGGTTAATGGCGAAAATGATGCGATGGGACACCGAAGGAAGGGTAGTTTTGGGTCCAAGAAGGTCAAGTTGCATGTGGAATCCCCTTATGAAGTCATATCAGAAGAGAAAGTGGGTGAACAAATATCACCGTGTCCGGTTCCAACTGCAAATGATTCTTCTACTGATTGTGAAGCTCCTCCTCAGTCTGAAGAGTTGGAGGATGATAACGTTGCTTATTTCATAAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAAGGGGAAGTGGGAGCTGGGAATGATACAGTCAACTTCTGGAGAGGAAGCATCTGTTTCTCTCTCAAATGGAAATGTTATGCAAGTGGCCAGGTCAGACCTCCTACCAGCTAATCCTGATATTTTAGAGGGTATTGAAGATCTTATACAGCTCAGTTATTTAAATGAGCCTTCAGTTCTTCACAATCTTCAGTATAGATATACTCAGGATATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCTTTCAAAAATGTCCAAGTTTATGGAATTGATTATGTCTCAGCTTATAGGCAGAAACTTACGGATAGTCCTCATGTTTATGCTTTGGCAGATGCAGCTTATAATGAGATGATGAGAGATGAAGCAAATCAGTCTATTATCATAAGTGGTGAAAGTGGAGCTGGGAAAACAGAGACCGCCAAAGTTGCTATGCAATACTTAGCTGCTATTGGTGGTGGCTGTTCAGGAATAGAAAATGAAATCCTTCAGACAAATTATATTCTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGATAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGTGCAATGGGGAAAATTTGTGGGGCAAAATCAAGAGTTGTTCAACTTGCCTTGGGCGAGAGGTCATATCACATATTTTATCAACTTTGTGCGGGATCTTCATCCGATCTAAAAGAAAGACTGAATCTTAGGGCGGCTAGCGAATATAAATATCTTAACCAAAGTGACTTCACAACAATTGATGGTGTTGATGATGCTAAAAAGTTTAATAAATTGATGAAAGCATTGGATGTTATTCGAATGTGCAAAGAGGATCAAGAGCTAGCTTTTAAGATGCTGGCTGCGATACTATGGTTGGGAAATATAACATTCCAGGACACTGATAATGAAAATCACATTGAGGTGGTGAATGATGAAGCTGTAACAAATGCTGCTGTGCTCATGGGTTGCAGATCCCAGGAGCTAATGGCTGCGTTATCTACCCATAAAATCCAAGCTGGCAAGGATACTATTACCAAGACATTGACCTTGCGGCAGGCAATTGATGCAAGAGATGCAATAGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAATAAGTCACTTCAAGTGGGTAAACGATGTACTGGGAGATCCATAAGTATCCTTGATATTTATGGATTTGAGTCATTCCAGAATAACAGCTTTGAACAATTTTGTATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAATTAGATGGCATTGATTGGACCAAAGTAGATTTTGAGGACAACCAAGTGTGTTTGGATCTTTTTGAAAAGAAGCCTCTTGGGCTGTTCTCTTTGTTGGACGAGGAATCAAATTTCCCCAGGGCCACTGATCTAACACTAGCCAACAAACTTAAGCAGCACCTGCACGCTAATCCTTGCTTTAAAGGGGAAAGAGGCAGGGCTTTTGGTGTCTGTCATTATGCTGGGGAGGTTTTGTATGATACAAGTGGCTTCCTAGAAAAGAATAGAGATCCACTACCATCTGATTCCATTCAACTACTGTCATCATGTAGTTGTGAACTGCTTCAGTTGTTCTCCAAGATGTTTAATCAGACTCAGAAGCAATCGAATTCCTTGCATGGAGGTGCTCTGGACTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAGTTGATGCATCAGCTGGAGAACACCACACCTCACTTTATTCGATGTATAAAGCCAAATACTAAGCAACTTCCTGGCATATATGATCAAGATCTAGTACTACAACAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCGAGGGCTGGATATCCTACTCGAATGACACATCAAGAATTTTCTAGAAGGTATGGGTTTCTGCTTTTTGAGGCAAACACATCTCAGGACCCATTGAGCATTTCGGTTGCGGTTTTGCAACAGTTTAATATCCCTCCTGAAATGTACCAAGTTGGCTTCACCAAACTGTACATTCGAACTGGGCAGATTGGGGCACTGGAAGACAGGAGAAAATATCTTTTGGAGGGACTACTTGTTATTCAAAAAAGCTTTCGTGGTTATCAAGCTCGCTGTCATTACCATGAGATTAAGAAGGGAGTGACTACTTTACAATCATTTGTTCGGGGAGAAATTGGAAGAAGGGCATATGGTGTTTTGGTGAAGTCTTCTATGACTATTTCTTCTGAAAATATCAAGGAAATGCTGGCAGCCACAACACTACAATCTGTAATTCGTGGATGGCTGGTTCGGAGGAATTCTGGTGACTTGAATTACTCAAAGAAAAGTCATGAAAATGCAAGATCTAGGCGAAGGTCACGTGTGAATATGCCCGAAGAAAAGGATGTGCCAAGTGAGCGGGTCCAGAATCTACCTTCAGCTTTAGCTGAACTCCAAAGGCGGGTTGTGAAGGCTGAAGTTACCATAACGCAAAAGGAAGGGGAAAATGCTGAATTGAAGGATCAGCTAAAACAGTTTGAGAGTAGATGGATGGAGTACGAGAAAAGGATGAAATCAATGGAGGAGATGTGGCAAAGACAAATGTCATCTTTGCAAATGAGTCTTGCTGCTGCTAGAAAGAGCCTTGCTTCTGAGAATGCCAACAATCAACATGCAAGACGTGATGTTTCATCACCTTTCACCTATGATTCGGAAGATGCTTCCATGGGATCTCGAACACCTAGTGCAAGCACACCTTTGAAGTATTCTACTAGTATTTCTGAAGCTGGACTAGGGAGAGATGCTAATGGTGCTTTGGCTTCAGTGAGCCACCTGATGAAGGAATTTGATCAACGCAGACAGACCTTTGATTTTGATGCCAGAAATCTGGTTGATGTTAGAACAGGTCAATCTACTAACATGAATTCCATTGAAGAACTTCGGAAACTCAAACATAGGTTTGAGGGGTGGAAAAAAGAATACAAGGTTAGGTTAAAAGAAACAAAAGCAAGACTTCATAAATTAGGGAATTCAGAAATGGATAAAAGGCGGAGATGGTGGGGGAAGCTGAGTTCTAGAGCACTATAG 3561 0.417 MMLSASMSALTRSSLEEMLESLRKRDEEERPKDLPPALPSRPQSRARMPPARRSLPNSFKVNGENDAMGHRRKGSFGSKKVKLHVESPYEVISEEKVGEQISPCPVPTANDSSTDCEAPPQSEELEDDNVAYFIKKKLHVWCRQPKGKWELGMIQSTSGEEASVSLSNGNVMQVARSDLLPANPDILEGIEDLIQLSYLNEPSVLHNLQYRYTQDMIYSKAGPILIALNPFKNVQVYGIDYVSAYRQKLTDSPHVYALADAAYNEMMRDEANQSIIISGESGAGKTETAKVAMQYLAAIGGGCSGIENEILQTNYILEAFGNAKTSRNDNSSRFGKLIEIHFSAMGKICGAKSRVVQLALGERSYHIFYQLCAGSSSDLKERLNLRAASEYKYLNQSDFTTIDGVDDAKKFNKLMKALDVIRMCKEDQELAFKMLAAILWLGNITFQDTDNENHIEVVNDEAVTNAAVLMGCRSQELMAALSTHKIQAGKDTITKTLTLRQAIDARDAIAKFIYASLFDWLVEQVNKSLQVGKRCTGRSISILDIYGFESFQNNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTKVDFEDNQVCLDLFEKKPLGLFSLLDEESNFPRATDLTLANKLKQHLHANPCFKGERGRAFGVCHYAGEVLYDTSGFLEKNRDPLPSDSIQLLSSCSCELLQLFSKMFNQTQKQSNSLHGGALDSQKQSVGTKFKGQLFKLMHQLENTTPHFIRCIKPNTKQLPGIYDQDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFSRRYGFLLFEANTSQDPLSISVAVLQQFNIPPEMYQVGFTKLYIRTGQIGALEDRRKYLLEGLLVIQKSFRGYQARCHYHEIKKGVTTLQSFVRGEIGRRAYGVLVKSSMTISSENIKEMLAATTLQSVIRGWLVRRNSGDLNYSKKSHENARSRRRSRVNMPEEKDVPSERVQNLPSALAELQRRVVKAEVTITQKEGENAELKDQLKQFESRWMEYEKRMKSMEEMWQRQMSSLQMSLAAARKSLASENANNQHARRDVSSPFTYDSEDASMGSRTPSASTPLKYSTSISEAGLGRDANGALASVSHLMKEFDQRRQTFDFDARNLVDVRTGQSTNMNSIEELRKLKHRFEGWKKEYKVRLKETKARLHKLGNSEMDKRRRWWGKLSSRAL* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0889 1186 SMART iq_5 874 896 IPR000048 GO:0005515
Pvu5g0889 1186 SMART iq_5 851 873 IPR000048 GO:0005515
Pvu5g0889 1186 SMART iq_5 911 933 IPR000048 GO:0005515
Pvu5g0889 1186 Gene3D - 856 902 - -
Pvu5g0889 1186 Gene3D Kinesin motor domain 187 783 IPR036961 -
Pvu5g0889 1186 Pfam Myosin head (motor domain) 191 838 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu5g0889 1186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 899 IPR027417 -
Pvu5g0889 1186 ProSiteProfiles IQ motif profile. 875 904 IPR000048 GO:0005515
Pvu5g0889 1186 Coils Coil 1149 1169 - -
Pvu5g0889 1186 ProSiteProfiles Myosin motor domain profile. 188 850 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu5g0889 1186 MobiDBLite consensus disorder prediction 937 966 - -
Pvu5g0889 1186 Gene3D - 363 419 - -
Pvu5g0889 1186 Pfam IQ calmodulin-binding motif 915 931 IPR000048 GO:0005515
Pvu5g0889 1186 Pfam IQ calmodulin-binding motif 858 873 IPR000048 GO:0005515
Pvu5g0889 1186 Gene3D - 784 851 - -
Pvu5g0889 1186 Gene3D Myosin VI head, motor domain, U50 subdomain 420 528 - -
Pvu5g0889 1186 MobiDBLite consensus disorder prediction 105 119 - -
Pvu5g0889 1186 MobiDBLite consensus disorder prediction 1 15 - -
Pvu5g0889 1186 PANTHER MYOSIN 118 1184 - -
Pvu5g0889 1186 PRINTS Myosin heavy chain signature 218 237 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu5g0889 1186 PRINTS Myosin heavy chain signature 272 297 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu5g0889 1186 PRINTS Myosin heavy chain signature 315 342 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu5g0889 1186 PRINTS Myosin heavy chain signature 539 567 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu5g0889 1186 PRINTS Myosin heavy chain signature 592 620 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu5g0889 1186 MobiDBLite consensus disorder prediction 101 123 - -
Pvu5g0889 1186 MobiDBLite consensus disorder prediction 17 35 - -
Pvu5g0889 1186 MobiDBLite consensus disorder prediction 1 78 - -
Pvu5g0889 1186 Gene3D - 551 740 - -
Pvu5g0889 1186 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 135 184 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pvu5g0889 1186 Coils Coil 973 1021 - -
Pvu5g0889 1186 MobiDBLite consensus disorder prediction 937 964 - -
Pvu5g0889 1186 MobiDBLite consensus disorder prediction 1040 1079 - -
Pvu5g0889 1186 Coils Coil 1033 1053 - -
Pvu5g0889 1186 CDD MYSc_Myo8 202 838 IPR036022 -
Pvu5g0889 1186 ProSiteProfiles IQ motif profile. 852 881 IPR000048 GO:0005515
Pvu5g0889 1186 ProSiteProfiles IQ motif profile. 912 941 IPR000048 GO:0005515
Pvu5g0889 1186 PANTHER MYOSIN-2 ISOFORM X1 118 1184 - -
Pvu5g0889 1186 SMART MYSc_2a 182 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0889 Pvu-Chr5 22280293 22290404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0889 1 1180 Myosins gene family AT5G54280 61.870 0.0 1518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0889 5 22280293 22290404 Pvu11g1611 11 41014856 41029550 PCT