Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0888 ATGGCAGCAACATTGATGGCAGCAACAAGTAGTTCTGGTACTGTTCTTAAGTCAACTCCTTTCCTTGGCCAAGGCAAGGGTGCCAATGCCAACCCTCTTAGGGATGTTGTCTCAATGGGAACCGGGAAGTACACCATGAGCAATGAGTTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTCTCAGCTCAAACCCCTTCATACTTGAAGGGTGAATTCCCAGGTGATTATGGATGGGACACTGCTGGCTTATCTGCTGACCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCCATGCTTGGAGCACTGGGCTGCATCACCCCGGAGGTGCTAGAGAAGTGGTTGAGAGTGGACTTCAAGGAGCCCGTATGGTTCAAAGCTGGGGCCCAGATATTCTCAGAAGGTGGGCTTGACTATTTGGGGAACCCAAACCTTGTCCATGCCCAAAGCATCTTGGCAGTGCTGGGCTTCCAAGTAGTTCTGATGGGCCTTGTTGAAGGGTTCCGCATCAATGGGCTTGATGGAGTAGGAGAGGGCAACAACCTTTACCCTGGGGGCCAGTACTTTGACCCACTGGGCCTGGCTGATGACCCAGTAAATTTTGCTGAGCTAAAAGTGAAGGAGATAAAGAATGGAAGGTTGGCCATGTTCTCTATGTTTGGGTTTTTTGTTCAAGCCATTGTAACTGGCAAAGGCCCATTGGAGAACCTGTTGGACCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTTTGCCACCAAGTTTGCCCCTGGATCTTAA 810 0.5062 MAATLMAATSSSGTVLKSTPFLGQGKGANANPLRDVVSMGTGKYTMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADDPVNFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVFATKFAPGS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0888 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 269 IPR001344 GO:0009765|GO:0016020
Pvu5g0888 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Pvu5g0888 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Pvu5g0888 269 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 7 269 - -
Pvu5g0888 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0888 Pvu-Chr5 22276246 22277992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0888 1 268 Chloroplast and Mitochondria Gene Families AT1G29930 66.052 3.99e-120 342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0888 5 22276246 22277992 Pvu11g1615 11 41091969 41094161 PCT