Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0839 ATGGAATCGGTGATGCCATTGGCCGTGACTCCGCGAAAGAAGCTGGCGCGTAGTTTTGCCAAGGTTCTTCATGTCAAAGCGCTGATTGGGATTGCCTCTGTTGATGGGTTGAAGAATGTTATATCTGATGCTAATCTCAAGGATGAAGGGAACATGGGAAAGAGTAAGAGTTCACTGAATTGGTCTGAGTCTTTCAACCAAGATGATGATGAAGAGCTTCATGAGAGAATGGCCAATGAAGCTCTTCTAGCAAAGCTTTTTGCTAGCATTTCAACTGTTAAAGGTGCATATGCTGAGTTGCAGTATTCTCAGTCACCTTTTGACCCTGATGGAATTCAAGCTGCTGATCAATTGCTAGTGTCTGAGTTGAAAAACTTGTCTGAGCTGAAACAATGTTTCTTGAAGAAACAGTTTGATCCTTCGCCTGAGACAGCTATTGTTGAGTCTGAATCCAAGGAGCTGCAGGGTGTGATAAAGACATATGAGATGATGGGGAAGAAGCTAGAGTCACAGGTGCGACTCAAGGATTCCGAGGTTATTTTTCTTAGGGAGAAGTTAGAGGAAGCTAGTAGGCGTAACAAGGCAATTGAAAAGAGATTAAATCAAAGCGGCCAACTAGCTGTGCTTGATAATGTTCACATATCAGGTTTAAGTCCTACCCATTTTATCACAGTTCTTCGCCATGCGGTTAGGTCGGTTCGCAACTTTGTGAGGGTGATTGTGGATGGGATGAGATCTGCAGGTTGGGATATTGATGCGGCAGTCAATGCCATTGAGCAGAATGTGGTTTATTTGGCAGAAGATCACAAGTGTTTCGCAATTGAGGCATTTGTTTGCAGGGAGATGTTTGATGCTTTCCACTTCCCTAACTTTTCTCTGTCAAATGAGTCTCTCCCTGATAGAAGTAGGAGGCAACAGTGGTTCTTTGGGAGGTTCAATGAGATGAAATCCATGAAGGCAAAGGACTTCCTTGCTGAGAAGCCAAGATCATCATTTGCAAAGTTTTGCCGGGTGAAGTACTTGAAACTTGTTCATCCCAAGATGGAGTCATCATTTTTTGGTAACATGAGTCACAGGAACCTTGTAAATGCTGGAGAGTTTCCAGACACTGCATTCTTCACATCATTTGCAGAGATGGCCAAGAGGGTATGGCTTCTACACTGCTTGGCCTTCGCTTTTGAGCCCCAGGCTTCAATTTTCCAAGTGGGGAAGGGGTATAGATTTTCTGATGTGTACATGGAAAGTGTGAATGACGAAATCTTCCTCTATTCAGAAGTGGAATCAGATCCACAAGTTGCTTTCACAGTAGTTCCGGGGTTTAAGATTGGTAAAACTGTTATACAGTGTCAAGTGTACCTCTCACAGCACCAAAGCAAAAGGCAAAAAAGTTCAGTTCCACAAAGCATAGGTAGCACCAGGCACTAG 1425 0.4358 MESVMPLAVTPRKKLARSFAKVLHVKALIGIASVDGLKNVISDANLKDEGNMGKSKSSLNWSESFNQDDDEELHERMANEALLAKLFASISTVKGAYAELQYSQSPFDPDGIQAADQLLVSELKNLSELKQCFLKKQFDPSPETAIVESESKELQGVIKTYEMMGKKLESQVRLKDSEVIFLREKLEEASRRNKAIEKRLNQSGQLAVLDNVHISGLSPTHFITVLRHAVRSVRNFVRVIVDGMRSAGWDIDAAVNAIEQNVVYLAEDHKCFAIEAFVCREMFDAFHFPNFSLSNESLPDRSRRQQWFFGRFNEMKSMKAKDFLAEKPRSSFAKFCRVKYLKLVHPKMESSFFGNMSHRNLVNAGEFPDTAFFTSFAEMAKRVWLLHCLAFAFEPQASIFQVGKGYRFSDVYMESVNDEIFLYSEVESDPQVAFTVVPGFKIGKTVIQCQVYLSQHQSKRQKSSVPQSIGSTRH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0839 474 Coils Coil 179 206 - -
Pvu5g0839 474 Pfam Plant protein of unknown function (DUF641) 76 199 IPR006943 -
Pvu5g0839 474 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 453 IPR040225 GO:0009639|GO:0009959
Pvu5g0839 474 PANTHER OS01G0203800 PROTEIN 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0839 Pvu-Chr5 19242891 19247870 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0839 5 19242891 19247870 Pvu11g1718 11 43492936 43497825 ECH
Pvu5g0839 5 19242891 19247870 Pvu5g0839 5 19242891 19247870 ECH