Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0767 ATGGTGGGCTCAGGAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAAAAGGGTGTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCGAGAGTTCGAGGTGGTAATGGCTGCAAGGTTGGAGATGACAACGGTAGCTTGATGTTGATGTGGGAAGATGGTTTCTGCCGAGGAAGTATTGATGGAGAGGATCCTGTGAGAAAGGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAACCGAATATCTCCAACTATTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAGTGGACAGACCAGTTTGAGTCAGGCATTCAGACCATAGCTGTAATTCAAGCTGGGCATGGACTTCTCCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTTCATTTTGTGCTTAGAATGAGACACACTTTTGAGTCCCTTGGCTACCAATCTGGTTTCTACCTCTCCCAACTCTTCTCTTCAACAAGGAACACTTCCTCTTCTACTTCTCTTCCCTCAAAACCATCTACCATTCCAATTAGGCCACCTCCACTCTTCAACTGGGGTCAGAGGCCACTTTCTTCTGCCACCTCCATGTTATCCTCACCCAATTTCCAACAACACACAGCTAGACTTGGGTTCCCTAAAGATGAGGCAAACATGTTTCTCATTCCTCATGCATCATCTGAGAGTGCAAGAGTGGAGGACATGATTGGGGAACATGAAAACGACATAAAATGGCCCAATGGCTTGTCTTTCTTCAATGCTCTCACCGGAAGAACGGATGATGCCAAGCTTTTGTTCAATCCTGATACCTTGGGAAGCAAACCAGGTGATCAAACTCAGCATCACCCTCTCAGTCAAAATCCCAATTCAGATGCCTCCAACATGCAAAATGCTAGTGCAACCAACCCAAATGAGTTCTTGAGCTTGGATAACAACCAAGATGATGCAAGGAAAATGGACAAGTTCAAGAGGAGCTTCACTCTACCTGCAAGAGTAGCCTCATCATCTTCATCCACTTCAATGGATCACCATCAACAACAAGGTGTGCAGTATAGGAATTCAGAAGGAGGTATGTACCCGGATGTCATGGAAACCTTTTTGGAGTGA 1221 0.4611 MVGSGASDRSKEAVGMMALHEALKRVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGSIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSTIPIRPPPLFNWGQRPLSSATSMLSSPNFQQHTARLGFPKDEANMFLIPHASSESARVEDMIGEHENDIKWPNGLSFFNALTGRTDDAKLLFNPDTLGSKPGDQTQHHPLSQNPNSDASNMQNASATNPNEFLSLDNNQDDARKMDKFKRSFTLPARVASSSSSTSMDHHQQQGVQYRNSEGGMYPDVMETFLE* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0767 406 MobiDBLite consensus disorder prediction 310 348 - -
Pvu5g0767 406 MobiDBLite consensus disorder prediction 369 395 - -
Pvu5g0767 406 MobiDBLite consensus disorder prediction 369 391 - -
Pvu5g0767 406 PANTHER GB|AAF34833.1 1 406 IPR044170 -
Pvu5g0767 406 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 75 IPR025610 -
Pvu5g0767 406 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 82 180 IPR025610 -
Pvu5g0767 406 MobiDBLite consensus disorder prediction 304 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0767 Pvu-Chr5 12997173 12999809 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0767 20 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.323 4.66e-21 93.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0767 5 12997173 12999809 Pvu5g0767 5 12997173 12999809 ECH
Pvu5g0767 5 12997173 12999809 Pvu11g1712 11 43324766 43327888 PCT