Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0763 ATGGTGCTGCTCAGATGTTTCTCAATGACACTTTTGCAATGGTGTTTTTTGGCTTCCTTAGTTTGCTTGTCACTAGGGCTTAATAATAATCAAGCCCCTTGTGACCCTCATGATCTATCAGCTCTGAAGAAGTTTGCAGGAAAACTTACCAGTGGTTTTATCCTCACAGCATGGTCCAATGACACTGTATGCTGCAACTGGCGTGGAGTTGTTTGTGATAATGTGACTGGAGGTGGTGGAACAGTTACTAGTAGAGTGACCAAGTTGATCCTGCCTGAAATGGGTCTCAATGGCACAATTTCACCCTCTTTAGCACAGCTAGATCAGCTCAGTGTGCTGAATCTTTCATTGAATCGCCTTAAAGGTGAATTGCCTGTGGAGTTCTCCCAGTTGAAGCTGTTGAAGTTCCTTGATGTGAGCCATAATATGCTGTCTGGACCTGTTGCTGGAGCCCTTTCTGGTCTGCAATCCATTGAAGTATTGAATATTTCTAGCAATTCACTTTCTGGAGTTCTTTTCCCTTTTGAGGAGTTCCCTCATCTCATTGCTCTAAACGTGAGCAACAATTCATTCACTGGCGGATTCAGTTCACAAATTTGCAGTGCTACCAAGGAACTTCGCACCCTTGATTTGTCAGCAAATAATTTTGTTGGTGGTCTTGAAGGCTTGAACAACTGCACCACATCTCTACAACAGCTGCATTTGGATTCCAATTCATTTACTGGCCCTCTTCCAGATTCCTTGTATTCAATGTCAGCCTTGAAGGAGCTCTCCGTCTCTGCCAACAATTTTTCTGGCCAGTTAAGCAAGCAACTAAGTAAGCTCTCTAACCTAAAAATTCTGGTGCTTTGTGGAAACAGGTTTACTGGGGAACTTCCAAATGTATTTGGGAATCTTTTGCAGCTAGAAGAATTAGAAGCACATGGCAATTCATTTTCTGGACCCTTTCCCTCCACCTTGGCTTTATGCTCTAAGCTTAGGGTGCTTAACCTTCGAAATAATTCCTTGTCAGGGCCTATTAATCTTAATTTCACTGGCTTGTCTAATCTTCAAACACTCGACCTTGCTACTAATCATTTCACTGGATACCTTCCAACTTCCCTGTCCCATTGTCGTGAATTGAAGGTTTTAAGTCTTGCTAGGAATGGCTTAACTGGCTCTATCCCCGAAAACTATGCAAACCTAAGTTCACTTTTGTTTGTATCCTTGTCAAACAACAGCATTGAGAACTTATCTCGGGCAGTGTCTGTTATGCAGCAGTGCAAAAATCTCACCACTCTTATCCTCACCAAGAATTTCCATGGTGAGGAAATTCCAAAAAGTGCCACGGTGGGATTTGAGAGCCTTATGGTTTTAGCACTTGGAAATTGTGGTCTTAAAGGTCACATTCCGTCTTGGTTATCCAATTGCAGGAAGTTGGCAGTTCTTGACTTGTCTTGGAACCATTTGAATGGTAGTGTTCCTTCTTGGATTGGTCAGATGGACAGTTTGTTCTATATCGATTTCTCGAATAATTCTCTTACAGGAGAAATACCAAAAAGTTTGACAGAGTTGAAGGGCCTCATGTGTGCAAACTGTAATAGAGCAAATCTTGCTGCTTTTGCATTCATTCCTCTCTTTGTTAAGAGAAACACAAGTGCAAGTGGACTGCAATATAACCAGGCCTCAAGTTTCCCTCCTTCAATTTACCTGAGCAATAACATATTGAGTGGAAATATATGGCCCGAAATTGGTCAACTGAAAGCTCTTCATGTCTTGGACTTAAGCAGGAACAACATAACTGGTACCATTCCTAGCACAATTTCAGAGATGGAGAACTTGGAATCCTTAGATTTGTCTTATAATGATCTTTCTGGAGAAATTCCTCCATCATTTAACAACCTCACTTTCTTGTCAAAGTTCAGTGTGGCATATAATCGGTTAGAGGGATCAATTCCAACTGGGGGCCAATTTTTAAGCTTCCCAAGTTCAAGCTTTGAGGGCAACGAAGGGCTTTGTAGGGAAATTGATTCTCCTTGCAAAATTGTCAACAATACAAAGCCCATAATTTCTTCTGGTTCTTCCAAAAAGCTTGGTAGAAGCAATGTCCTCGGCATAACAATCAGTATAGGGATAGGGCTTGCACTTCTTCTTGCAATTATACTGCTAAGAACGTCAAGGAGGGATGACGATAAGCCCATCGATAACTATGATGAGGAACTCAATGGCAGGCCACACAGGTTATCTGAGGCACTTGTTTCCTCAAAGTTGGTGCTTTTCCAGAATTCAGATTGCAAGGATCTTACAGTTGCAGATTTGTTAAAATCCACAAACAATTTCAACCAGGCAAATATTATTGGTTGTGGTGGGTTTGGTCTTGTCTACAAGGCATATCTTCCAAATGGCACGAAAGCAGCTATCAAGAGACTTTCAGGTGACTGTGGTCAGATGGAACGTGAATTCCAAGCTGAAGTAGAGGCCCTCTCAAGAGCTCAACACAAGAACCTTGTTTCTCTGAAAGGATATTGTCGGCATGGCAATGACAGATTGCTAATATACTCGTACTTGGAGAATGGAAGCTTGGATTATTGGCTGCATGAGTGTGTGGATGAAAGCGCAGCTCTAAAATGGGATGCAAGACTCAAGATTGCACAAGGTGCTGCACGTGGATTAGCTTACTTGCATAAGGGTTGTGAACCATTCATAGTGCATCGGGACGTTAAATCTAGCAACATTCTTTTGGATGACAAGTTTGAAGCTCATTTGGCTGATTTTGGTCTCTCACGACTACTTCAACCATATGACACTCATGTCACCACTGACTTGGTAGGAACTTTAGGATATATTCCTCCAGAATATAGTCAGACACTGACAGCAACCTTTAGGGGTGATGTTTATAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACTGGTAGAAGACCTGTGGAAGTCATCAAGGGGAAAAATTGCAGAAATCTGGTTTTTTGGGTGTTTCAGATGAAATCTGAGAATAAGGAGCAGGATATTTTTGATCCAGCAATTTGGCATAAGGATCGTGAGAAACAGCTACTAGAGATGCTTGCCATTGCTTGTAAATGTCTAGACCAAGATCCTAGGCAGAGACCCGCTATTGAAGTAGTTGTTTCATGGCTTGATTGTGTAAGATTTGATGGTTCTCAACAGTGA 3165 0.418 MVLLRCFSMTLLQWCFLASLVCLSLGLNNNQAPCDPHDLSALKKFAGKLTSGFILTAWSNDTVCCNWRGVVCDNVTGGGGTVTSRVTKLILPEMGLNGTISPSLAQLDQLSVLNLSLNRLKGELPVEFSQLKLLKFLDVSHNMLSGPVAGALSGLQSIEVLNISSNSLSGVLFPFEEFPHLIALNVSNNSFTGGFSSQICSATKELRTLDLSANNFVGGLEGLNNCTTSLQQLHLDSNSFTGPLPDSLYSMSALKELSVSANNFSGQLSKQLSKLSNLKILVLCGNRFTGELPNVFGNLLQLEELEAHGNSFSGPFPSTLALCSKLRVLNLRNNSLSGPINLNFTGLSNLQTLDLATNHFTGYLPTSLSHCRELKVLSLARNGLTGSIPENYANLSSLLFVSLSNNSIENLSRAVSVMQQCKNLTTLILTKNFHGEEIPKSATVGFESLMVLALGNCGLKGHIPSWLSNCRKLAVLDLSWNHLNGSVPSWIGQMDSLFYIDFSNNSLTGEIPKSLTELKGLMCANCNRANLAAFAFIPLFVKRNTSASGLQYNQASSFPPSIYLSNNILSGNIWPEIGQLKALHVLDLSRNNITGTIPSTISEMENLESLDLSYNDLSGEIPPSFNNLTFLSKFSVAYNRLEGSIPTGGQFLSFPSSSFEGNEGLCREIDSPCKIVNNTKPIISSGSSKKLGRSNVLGITISIGIGLALLLAIILLRTSRRDDDKPIDNYDEELNGRPHRLSEALVSSKLVLFQNSDCKDLTVADLLKSTNNFNQANIIGCGGFGLVYKAYLPNGTKAAIKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYLENGSLDYWLHECVDESAALKWDARLKIAQGAARGLAYLHKGCEPFIVHRDVKSSNILLDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVFWVFQMKSENKEQDIFDPAIWHKDREKQLLEMLAIACKCLDQDPRQRPAIEVVVSWLDCVRFDGSQQ* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0763 1054 SUPERFAMILY Protein kinase-like (PK-like) 755 1044 IPR011009 -
Pvu5g0763 1054 SUPERFAMILY L domain-like 550 679 - -
Pvu5g0763 1054 Gene3D Phosphorylase Kinase; domain 1 738 848 - -
Pvu5g0763 1054 Gene3D Ribonuclease Inhibitor 366 680 IPR032675 -
Pvu5g0763 1054 PRINTS Leucine-rich repeat signature 583 596 - -
Pvu5g0763 1054 PRINTS Leucine-rich repeat signature 604 617 - -
Pvu5g0763 1054 PANTHER PHYTOSULFOKINE RECEPTOR 2 617 1047 - -
Pvu5g0763 1054 PANTHER PHYTOSULFOKINE RECEPTOR 2 177 284 - -
Pvu5g0763 1054 PANTHER PHYTOSULFOKINE RECEPTOR 2 446 513 - -
Pvu5g0763 1054 PANTHER PHYTOSULFOKINE RECEPTOR 2 32 166 - -
Pvu5g0763 1054 PANTHER PHYTOSULFOKINE RECEPTOR 2 284 438 - -
Pvu5g0763 1054 PANTHER PHYTOSULFOKINE RECEPTOR 2 563 621 - -
Pvu5g0763 1054 SUPERFAMILY RNI-like 227 527 - -
Pvu5g0763 1054 Gene3D Ribonuclease Inhibitor 268 365 IPR032675 -
Pvu5g0763 1054 Gene3D Ribonuclease Inhibitor 173 267 IPR032675 -
Pvu5g0763 1054 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 563 621 - -
Pvu5g0763 1054 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 284 438 - -
Pvu5g0763 1054 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 617 1047 - -
Pvu5g0763 1054 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 177 284 - -
Pvu5g0763 1054 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 446 513 - -
Pvu5g0763 1054 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 166 - -
Pvu5g0763 1054 Gene3D Ribonuclease Inhibitor 37 157 IPR032675 -
Pvu5g0763 1054 Gene3D Transferase(Phosphotransferase) domain 1 849 1049 - -
Pvu5g0763 1054 ProSitePatterns Protein kinases ATP-binding region signature. 779 801 IPR017441 GO:0005524
Pvu5g0763 1054 ProSiteProfiles Leucine-rich repeat profile. 606 628 IPR001611 GO:0005515
Pvu5g0763 1054 SMART LRR_typ_2 580 603 IPR003591 -
Pvu5g0763 1054 SMART LRR_typ_2 604 627 IPR003591 -
Pvu5g0763 1054 SMART LRR_typ_2 347 370 IPR003591 -
Pvu5g0763 1054 SMART LRR_typ_2 275 298 IPR003591 -
Pvu5g0763 1054 SMART LRR_typ_2 107 130 IPR003591 -
Pvu5g0763 1054 SMART LRR_typ_2 395 418 IPR003591 -
Pvu5g0763 1054 SMART LRR_typ_2 131 154 IPR003591 -
Pvu5g0763 1054 Pfam Leucine rich repeat 325 384 IPR001611 GO:0005515
Pvu5g0763 1054 Pfam Leucine rich repeat 423 483 IPR001611 GO:0005515
Pvu5g0763 1054 Pfam Leucine rich repeat 582 641 IPR001611 GO:0005515
Pvu5g0763 1054 CDD STKc_IRAK 779 1045 - -
Pvu5g0763 1054 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672|GO:0006468
Pvu5g0763 1054 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Pvu5g0763 1054 Pfam Protein kinase domain 774 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0763 1054 ProSiteProfiles Protein kinase domain profile. 773 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0763 1054 SUPERFAMILY L domain-like 34 305 - -
Pvu5g0763 1054 SMART serkin_6 773 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0763 Pvu-Chr5 12864117 12867889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0763 1 1054 Receptor kinase-like Gene Family AT1G55610 34.105 5.53e-166 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pvu5g0763 Pkinase 3.7e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0763 5 12864117 12867889 Pvu11g1669 11 42356831 42360895 PCT