Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0068 ATGGCGATGCGCGACCTCGTTTCCGGTGCCGCCGCTTGCGGCGACTCTTCTTCTTCCTCCGCTAATCCTCTCGCTTCTCTAGCCAACGCCCTTGTTGGCTCTTCCTCCAAAACTCAGGAGAGGCTGAAGGAGATTCCGACGTCCACTCTCACTGATCCTACCTCGCAATTTTACTCCACCGCTCTCCCCGTCAATCACCTTCCCGGCTCCGAATTCGATAAGCCGCTATTGGATGCAAACTATCAGGCTTCGGAGTTTTTGCATAGGTTCCGTGGCGCGAGTGGGCTCGAGGAGACGTGGGATGAGATACAGCGCGAGGGCGGGGTTGCCGGACAGCGGCAACTGGTGCCGGCGATTCAGCAGCCGCCGTTGGATGGGACACCACAAAGAGTTCTATCGAGTTTTCTGCACTCATTTCTTGACAGCAGCCGTGGTGGAGTGCCTTTTCATCCTACCCCTCTTCCGATGCTGGGTTTATCTGAAGGTGATAAACAATGCATACGGGACCGCAGCAGCATAATGGCCAGGCATCTCTTTGCAGATAAAAGTGAAGAATTTATTGATGCCCAAGTAAACGCCCTTCTATGCTCTCTAGATATTGATAGCAATGTCCGTGGTAAGGGACCTATGCCTGAAAGATTTCGGGAGCTGGAGGACTACTGGAATGAGTCTCAAGGCAATATGAGACCTGGTCCTCCTGCTGCAGACGGGTGGATTACTGAATTTAGTCAACATAGGGGAAAATATGATAATCCCGATTCATGGGCTAACTCCTTTGAGCAACAACATGGTGCGAATGGTTGGGTGTCTGAATTTGAACATTCCCAATTGTCATCAGTAGGTCAAATGCAAGGTATGAACGTGTCAAACTTTGCTGCAATGGAACAGACTCGTATGCTTGCAAATACATTGGCCCAAAATGGTGACCCTAAATTTCAGAACTCAAAATTCCTTCAATTTGTGTCAAAGATGAGCCGTGGCGAGTTGATTATTGATGACAACCAGGTTAAAGAGAATGCATCTGGAAATTGGGCTACAGAATATGATCAGCAATATAATGGTGGCCATGCATGGTCTGGAGAATTTTTAAATGATAAGGTTTATCATGGACCTGATCAGTGGGTGAATGAATATACAACTGAAGGACGGCAGCATGATGCACCTGATGATCAGTGGGTTAATGAATTTTCAAAGTTGAATGTTAATGATTGGGCAGATGAATTTGGTCAGCAGTTAGGTGAAGCAGCCTTAGGAGATGGCACTTCTGATAGTTGGGCACATGCATATGATGAGTTCTTAAATGAGCAAGTTGCTTCCAAGCAGCAGTTAGACAGTTCGAGGGGTGTGTATGTCTTTTCAGATTTAAACCCTTATGTTGGTCATCCAAATCCCCTAAAAGAAGGTCAAGATCTATTCAGAAAAGGACTTTTAAGTGAAGCAGTTCTAGCATTGGAAGCTGAAGTCCTAAAAAATCCTGAGAATGCTGAAGGGTGGAGACTGCTTGGAATAGCACATGCAGAGAATGATGATGACCAACAGGCTATTGCAGCAATGATGCGTGCGCAGGAGGCTGACCCGACAAACTTGGAAGTGCTTCTTGCTCTTGGTGTTAGTCATACAAATGAACTAGAGCAATCTGCTGCTTTGAAGTATCTATATGGATGGTTGCGCCATCACCCAAAATATGGAACACTTGCCCCACCCGAGATGTCCGATTCTTTGTACTATGCTGATGTTGCTAGGTTATTCAATGACGCTGCTGAACTATCTCCGGATGATGCAGATGTCCACATAGTTCTTGGGGTTATGTATAACTTATCCAGAGAATATGACAAAGCTATTGCATCTTTTGAAAGAGCATTGAAACTTAAGCCCCAGGATTACTCATTATGGAACAAACTGGGTGCTACACAAGCAAACAGTATTCAAAGTGCTGATGCAATAATGGCTTATCAACAGGCACTGGATTTAAAGCCTAATTATGTTCGTGCTTGGGCAAATATGGGTATCAGCTATGCAAACCAGGGTATGTACGACGAGTCCATTCGATATTATGTTAGAGCACTTGCCATGAATCCAAAAGCAGAGAACGCATGGCAATATTTGAGAATTTCATTGAGTTGTGCTTCTAGGAATGACATGTTGGAAGCTTGTGATAGGCGTAATTTGGACCTTCTCCAGAAGGAGTTTCCACTACAGTAG 2202 0.4546 MAMRDLVSGAAACGDSSSSSANPLASLANALVGSSSKTQERLKEIPTSTLTDPTSQFYSTALPVNHLPGSEFDKPLLDANYQASEFLHRFRGASGLEETWDEIQREGGVAGQRQLVPAIQQPPLDGTPQRVLSSFLHSFLDSSRGGVPFHPTPLPMLGLSEGDKQCIRDRSSIMARHLFADKSEEFIDAQVNALLCSLDIDSNVRGKGPMPERFRELEDYWNESQGNMRPGPPAADGWITEFSQHRGKYDNPDSWANSFEQQHGANGWVSEFEHSQLSSVGQMQGMNVSNFAAMEQTRMLANTLAQNGDPKFQNSKFLQFVSKMSRGELIIDDNQVKENASGNWATEYDQQYNGGHAWSGEFLNDKVYHGPDQWVNEYTTEGRQHDAPDDQWVNEFSKLNVNDWADEFGQQLGEAALGDGTSDSWAHAYDEFLNEQVASKQQLDSSRGVYVFSDLNPYVGHPNPLKEGQDLFRKGLLSEAVLALEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQEADPTNLEVLLALGVSHTNELEQSAALKYLYGWLRHHPKYGTLAPPEMSDSLYYADVARLFNDAAELSPDDADVHIVLGVMYNLSREYDKAIASFERALKLKPQDYSLWNKLGATQANSIQSADAIMAYQQALDLKPNYVRAWANMGISYANQGMYDESIRYYVRALAMNPKAENAWQYLRISLSCASRNDMLEACDRRNLDLLQKEFPLQ* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0068 733 Pfam Tetratricopeptide repeat 594 627 IPR001440 GO:0005515
Pvu5g0068 733 Pfam Tetratricopeptide repeat 663 694 IPR001440 GO:0005515
Pvu5g0068 733 Pfam Tetratricopeptide repeat 465 527 - -
Pvu5g0068 733 ProSiteProfiles TPR repeat profile. 662 695 IPR019734 GO:0005515
Pvu5g0068 733 PANTHER BNAC09G53570D PROTEIN 1 732 - -
Pvu5g0068 733 SMART tpr_5 662 695 IPR019734 GO:0005515
Pvu5g0068 733 SMART tpr_5 594 627 IPR019734 GO:0005515
Pvu5g0068 733 SMART tpr_5 495 528 IPR019734 GO:0005515
Pvu5g0068 733 SMART tpr_5 628 661 IPR019734 GO:0005515
Pvu5g0068 733 ProSiteProfiles TPR repeat region circular profile. 662 694 - -
Pvu5g0068 733 ProSiteProfiles TPR repeat region circular profile. 594 627 - -
Pvu5g0068 733 ProSiteProfiles TPR repeat profile. 594 627 IPR019734 GO:0005515
Pvu5g0068 733 SUPERFAMILY TPR-like 446 732 IPR011990 GO:0005515
Pvu5g0068 733 PANTHER PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 1 732 IPR024111 -
Pvu5g0068 733 ProSiteProfiles TPR repeat profile. 495 528 IPR019734 GO:0005515
Pvu5g0068 733 Gene3D Tetratricopeptide repeat domain 442 733 IPR011990 GO:0005515
Pvu5g0068 733 ProSiteProfiles TPR repeat profile. 628 661 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0068 607 725 Glycosyltransferase AT3G04240 31.933 9.32e-10 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0068 5 526072 538219 Pvu5g0068 5 526072 538219 ECH